Gene info for GFF4425 in Variovorax sp. SCN45

Annotation: Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8)
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 61,074 to 63,515
See nucleotide sequence around GFF4425 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4420 and GFF4421 are separated by 12 nucleotidesGFF4421 and GFF4422 overlap by 4 nucleotidesGFF4422 and GFF4423 are separated by 2 nucleotidesGFF4423 and GFF4424 overlap by 4 nucleotidesGFF4424 and GFF4425 are separated by 267 nucleotidesGFF4425 and GFF4426 are separated by 279 nucleotidesGFF4426 and GFF4427 overlap by 4 nucleotidesGFF4427 and GFF4428 are separated by 83 nucleotidesGFF4428 and GFF4429 are separated by 117 nucleotidesGFF4429 and GFF4430 overlap by 4 nucleotides GFF4420 - Conjugative transfer protein TrbL, at 56,202 to 57,581 GFF4420 GFF4421 - Conjugative transfer protein TrbF, at 57,594 to 58,298 GFF4421 GFF4422 - Conjugative transfer protein TrbG, at 58,295 to 59,293 GFF4422 GFF4423 - Conjugative transfer protein TrbI, at 59,296 to 60,564 GFF4423 GFF4424 - FIG00956188: hypothetical protein, at 60,561 to 60,806 GFF4424 GFF4425 - Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8), at 61,074 to 63,515 GFF4425 GFF4426 - Homolog of eukaryotic DNA ligase III, at 63,795 to 64,691 GFF4426 GFF4427 - hypothetical protein, at 64,688 to 65,827 GFF4427 GFF4428 - Signal recognition particle protein Ffh, at 65,911 to 67,299 GFF4428 GFF4429 - Inner membrane protein YpjD, at 67,417 to 68,232 GFF4429 GFF4430 - hypothetical protein, at 68,229 to 68,492 GFF4430
Locus Name Description Strand Phenotype
GFF4420 Conjugative transfer protein TrbL + insig.
GFF4421 Conjugative transfer protein TrbF + insig.
GFF4422 Conjugative transfer protein TrbG + insig.
GFF4423 Conjugative transfer protein TrbI + insig.
GFF4424 FIG00956188: hypothetical protein + insig.
GFF4425 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) + insig.
GFF4426 Homolog of eukaryotic DNA ligase III + insig.
GFF4427 hypothetical protein + insig.
GFF4428 Signal recognition particle protein Ffh - no data
GFF4429 Inner membrane protein YpjD + insig.
GFF4430 hypothetical protein + insig.

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