Gene info for GFF4416 in Variovorax sp. SCN45

Annotation: Conjugative transfer protein TrbD
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 52,397 to 52,669
See nucleotide sequence around GFF4416 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4411 and GFF4412 are separated by 234 nucleotidesGFF4412 and GFF4413 overlap by 4 nucleotidesGFF4413 and GFF4414 overlap by 4 nucleotidesGFF4414 and GFF4415 overlap by 4 nucleotidesGFF4415 and GFF4416 overlap by 4 nucleotidesGFF4416 and GFF4417 are separated by 12 nucleotidesGFF4417 and GFF4418 overlap by 4 nucleotidesGFF4418 and GFF4419 are separated by 12 nucleotidesGFF4419 and GFF4420 overlap by 4 nucleotidesGFF4420 and GFF4421 are separated by 12 nucleotides GFF4411 - Conjugative transfer protein TrbK, at 47,934 to 48,212 GFF4411 GFF4412 - Coupling protein VirD4, ATPase required for T-DNA transfer, at 48,447 to 50,480 GFF4412 GFF4413 - CopG domain-containing protein, at 50,477 to 50,953 GFF4413 GFF4414 - Conjugative transfer protein TrbB, at 50,950 to 52,014 GFF4414 GFF4415 - Conjugative transfer protein TrbC, at 52,011 to 52,400 GFF4415 GFF4416 - Conjugative transfer protein TrbD, at 52,397 to 52,669 GFF4416 GFF4417 - Conjugative transfer protein TrbE, at 52,682 to 55,156 GFF4417 GFF4418 - Conjugative transfer protein TrbJ, at 55,153 to 55,908 GFF4418 GFF4419 - Conjugative transfer protein TrbK, at 55,921 to 56,205 GFF4419 GFF4420 - Conjugative transfer protein TrbL, at 56,202 to 57,581 GFF4420 GFF4421 - Conjugative transfer protein TrbF, at 57,594 to 58,298 GFF4421
Locus Name Description Strand Phenotype
GFF4411 Conjugative transfer protein TrbK + insig.
GFF4412 Coupling protein VirD4, ATPase required for T-DNA transfer + cofit
GFF4413 CopG domain-containing protein + insig.
GFF4414 Conjugative transfer protein TrbB + insig.
GFF4415 Conjugative transfer protein TrbC + insig.
GFF4416 Conjugative transfer protein TrbD + insig.
GFF4417 Conjugative transfer protein TrbE + insig.
GFF4418 Conjugative transfer protein TrbJ + insig.
GFF4419 Conjugative transfer protein TrbK + no data
GFF4420 Conjugative transfer protein TrbL + insig.
GFF4421 Conjugative transfer protein TrbF + insig.

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