Gene info for GFF4412 in Variovorax sp. SCN45

Annotation: Coupling protein VirD4, ATPase required for T-DNA transfer
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 48,447 to 50,480
See nucleotide sequence around GFF4412 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4407 and GFF4408 are separated by 174 nucleotidesGFF4408 and GFF4409 overlap by 4 nucleotidesGFF4409 and GFF4410 are separated by 681 nucleotidesGFF4410 and GFF4411 overlap by 4 nucleotidesGFF4411 and GFF4412 are separated by 234 nucleotidesGFF4412 and GFF4413 overlap by 4 nucleotidesGFF4413 and GFF4414 overlap by 4 nucleotidesGFF4414 and GFF4415 overlap by 4 nucleotidesGFF4415 and GFF4416 overlap by 4 nucleotidesGFF4416 and GFF4417 are separated by 12 nucleotides GFF4407 - Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20), at 41,099 to 42,775 GFF4407 GFF4408 - 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type, at 42,950 to 44,575 GFF4408 GFF4409 - Aldehyde dehydrogenase (EC 1.2.1.3), at 44,572 to 46,311 GFF4409 GFF4410 - Transcriptional regulator, LysR family, at 46,993 to 47,937 GFF4410 GFF4411 - Conjugative transfer protein TrbK, at 47,934 to 48,212 GFF4411 GFF4412 - Coupling protein VirD4, ATPase required for T-DNA transfer, at 48,447 to 50,480 GFF4412 GFF4413 - CopG domain-containing protein, at 50,477 to 50,953 GFF4413 GFF4414 - Conjugative transfer protein TrbB, at 50,950 to 52,014 GFF4414 GFF4415 - Conjugative transfer protein TrbC, at 52,011 to 52,400 GFF4415 GFF4416 - Conjugative transfer protein TrbD, at 52,397 to 52,669 GFF4416 GFF4417 - Conjugative transfer protein TrbE, at 52,682 to 55,156 GFF4417
Locus Name Description Strand Phenotype
GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) + insig.
GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type + insig.
GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) + insig.
GFF4410 Transcriptional regulator, LysR family + insig.
GFF4411 Conjugative transfer protein TrbK + insig.
GFF4412 Coupling protein VirD4, ATPase required for T-DNA transfer + cofit
GFF4413 CopG domain-containing protein + insig.
GFF4414 Conjugative transfer protein TrbB + insig.
GFF4415 Conjugative transfer protein TrbC + insig.
GFF4416 Conjugative transfer protein TrbD + insig.
GFF4417 Conjugative transfer protein TrbE + insig.

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