Gene info for GFF4410 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 46,993 to 47,937
See nucleotide sequence around GFF4410 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4405 and GFF4406 are separated by 131 nucleotidesGFF4406 and GFF4407 are separated by 67 nucleotidesGFF4407 and GFF4408 are separated by 174 nucleotidesGFF4408 and GFF4409 overlap by 4 nucleotidesGFF4409 and GFF4410 are separated by 681 nucleotidesGFF4410 and GFF4411 overlap by 4 nucleotidesGFF4411 and GFF4412 are separated by 234 nucleotidesGFF4412 and GFF4413 overlap by 4 nucleotidesGFF4413 and GFF4414 overlap by 4 nucleotidesGFF4414 and GFF4415 overlap by 4 nucleotides GFF4405 - hypothetical protein, at 37,526 to 38,638 GFF4405 GFF4406 - Alkane-1 monooxygenase (EC 1.14.15.3), at 38,770 to 41,031 GFF4406 GFF4407 - Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20), at 41,099 to 42,775 GFF4407 GFF4408 - 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type, at 42,950 to 44,575 GFF4408 GFF4409 - Aldehyde dehydrogenase (EC 1.2.1.3), at 44,572 to 46,311 GFF4409 GFF4410 - Transcriptional regulator, LysR family, at 46,993 to 47,937 GFF4410 GFF4411 - Conjugative transfer protein TrbK, at 47,934 to 48,212 GFF4411 GFF4412 - Coupling protein VirD4, ATPase required for T-DNA transfer, at 48,447 to 50,480 GFF4412 GFF4413 - CopG domain-containing protein, at 50,477 to 50,953 GFF4413 GFF4414 - Conjugative transfer protein TrbB, at 50,950 to 52,014 GFF4414 GFF4415 - Conjugative transfer protein TrbC, at 52,011 to 52,400 GFF4415
Locus Name Description Strand Phenotype
GFF4405 hypothetical protein - insig.
GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) + cofit
GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) + insig.
GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type + insig.
GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) + insig.
GFF4410 Transcriptional regulator, LysR family + insig.
GFF4411 Conjugative transfer protein TrbK + insig.
GFF4412 Coupling protein VirD4, ATPase required for T-DNA transfer + cofit
GFF4413 CopG domain-containing protein + insig.
GFF4414 Conjugative transfer protein TrbB + insig.
GFF4415 Conjugative transfer protein TrbC + insig.

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