Gene info for GFF4392 in Variovorax sp. SCN45

Annotation: Efflux transport system, outer membrane factor (OMF) lipoprotein
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 23,784 to 25,268
See nucleotide sequence around GFF4392 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4387 and GFF4388 overlap by 4 nucleotidesGFF4388 and GFF4389 are separated by 436 nucleotidesGFF4389 and GFF4390 are separated by 457 nucleotidesGFF4390 and GFF4391 overlap by 4 nucleotidesGFF4391 and GFF4392 overlap by 8 nucleotidesGFF4392 and GFF4393 are separated by 9 nucleotidesGFF4393 and GFF4394 overlap by 4 nucleotidesGFF4394 and GFF4395 are separated by 10 nucleotidesGFF4395 and GFF4396 overlap by 4 nucleotidesGFF4396 and GFF4397 are separated by 257 nucleotides GFF4387 - Glycosidases, at 15,554 to 16,099 GFF4387 GFF4388 - Type IV secretory pathway, protease TraF, at 16,096 to 16,695 GFF4388 GFF4389 - Type IV secretory pathway, VirD2 components (relaxase), at 17,132 to 19,126 GFF4389 GFF4390 - Membrane-fusion protein, at 19,584 to 20,471 GFF4390 GFF4391 - Acriflavin resistance protein, at 20,468 to 23,791 GFF4391 GFF4392 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 23,784 to 25,268 GFF4392 GFF4393 - Uncharacterized ABC1 family protein XCC_1720, at 25,278 to 27,026 GFF4393 GFF4394 - FIG00613342: Bacterial patatin-like phospholipase domain containing protein, at 27,023 to 27,997 GFF4394 GFF4395 - Octaprenyl diphosphate synthase (EC 2.5.1.90), at 28,008 to 28,793 GFF4395 GFF4396 - Mobile element protein, at 28,790 to 29,743 GFF4396 GFF4397 - hypothetical protein, at 30,001 to 32,694 GFF4397
Locus Name Description Strand Phenotype
GFF4387 Glycosidases + insig.
GFF4388 Type IV secretory pathway, protease TraF + insig.
GFF4389 Type IV secretory pathway, VirD2 components (relaxase) + insig.
GFF4390 Membrane-fusion protein + insig.
GFF4391 Acriflavin resistance protein + insig.
GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein + insig.
GFF4393 Uncharacterized ABC1 family protein XCC_1720 + insig.
GFF4394 FIG00613342: Bacterial patatin-like phospholipase domain containing protein + insig.
GFF4395 Octaprenyl diphosphate synthase (EC 2.5.1.90) + insig.
GFF4396 Mobile element protein - cofit
GFF4397 hypothetical protein + cofit

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