Gene info for GFF4389 in Variovorax sp. SCN45

Annotation: Type IV secretory pathway, VirD2 components (relaxase)
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 17,132 to 19,126
See nucleotide sequence around GFF4389 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4384 and GFF4385 are separated by 265 nucleotidesGFF4385 and GFF4386 overlap by 4 nucleotidesGFF4386 and GFF4387 overlap by 4 nucleotidesGFF4387 and GFF4388 overlap by 4 nucleotidesGFF4388 and GFF4389 are separated by 436 nucleotidesGFF4389 and GFF4390 are separated by 457 nucleotidesGFF4390 and GFF4391 overlap by 4 nucleotidesGFF4391 and GFF4392 overlap by 8 nucleotidesGFF4392 and GFF4393 are separated by 9 nucleotidesGFF4393 and GFF4394 overlap by 4 nucleotides GFF4384 - Plasmid replication initiator protein, at 13,515 to 14,372 GFF4384 GFF4385 - ParA-like protein, at 14,638 to 15,276 GFF4385 GFF4386 - FIG00457034: hypothetical protein, at 15,273 to 15,557 GFF4386 GFF4387 - Glycosidases, at 15,554 to 16,099 GFF4387 GFF4388 - Type IV secretory pathway, protease TraF, at 16,096 to 16,695 GFF4388 GFF4389 - Type IV secretory pathway, VirD2 components (relaxase), at 17,132 to 19,126 GFF4389 GFF4390 - Membrane-fusion protein, at 19,584 to 20,471 GFF4390 GFF4391 - Acriflavin resistance protein, at 20,468 to 23,791 GFF4391 GFF4392 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 23,784 to 25,268 GFF4392 GFF4393 - Uncharacterized ABC1 family protein XCC_1720, at 25,278 to 27,026 GFF4393 GFF4394 - FIG00613342: Bacterial patatin-like phospholipase domain containing protein, at 27,023 to 27,997 GFF4394
Locus Name Description Strand Phenotype
GFF4384 Plasmid replication initiator protein + insig.
GFF4385 ParA-like protein + insig.
GFF4386 FIG00457034: hypothetical protein + insig.
GFF4387 Glycosidases + insig.
GFF4388 Type IV secretory pathway, protease TraF + insig.
GFF4389 Type IV secretory pathway, VirD2 components (relaxase) + insig.
GFF4390 Membrane-fusion protein + insig.
GFF4391 Acriflavin resistance protein + insig.
GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein + insig.
GFF4393 Uncharacterized ABC1 family protein XCC_1720 + insig.
GFF4394 FIG00613342: Bacterial patatin-like phospholipase domain containing protein + insig.

Or browse nearby genes

Or see the comparative fitness browser