Gene info for GFF4388 in Variovorax sp. SCN45

Annotation: Type IV secretory pathway, protease TraF
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 16,096 to 16,695
See nucleotide sequence around GFF4388 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4383 and GFF4384 are separated by 14 nucleotidesGFF4384 and GFF4385 are separated by 265 nucleotidesGFF4385 and GFF4386 overlap by 4 nucleotidesGFF4386 and GFF4387 overlap by 4 nucleotidesGFF4387 and GFF4388 overlap by 4 nucleotidesGFF4388 and GFF4389 are separated by 436 nucleotidesGFF4389 and GFF4390 are separated by 457 nucleotidesGFF4390 and GFF4391 overlap by 4 nucleotidesGFF4391 and GFF4392 overlap by 8 nucleotidesGFF4392 and GFF4393 are separated by 9 nucleotides GFF4383 - hypothetical protein, at 13,216 to 13,500 GFF4383 GFF4384 - Plasmid replication initiator protein, at 13,515 to 14,372 GFF4384 GFF4385 - ParA-like protein, at 14,638 to 15,276 GFF4385 GFF4386 - FIG00457034: hypothetical protein, at 15,273 to 15,557 GFF4386 GFF4387 - Glycosidases, at 15,554 to 16,099 GFF4387 GFF4388 - Type IV secretory pathway, protease TraF, at 16,096 to 16,695 GFF4388 GFF4389 - Type IV secretory pathway, VirD2 components (relaxase), at 17,132 to 19,126 GFF4389 GFF4390 - Membrane-fusion protein, at 19,584 to 20,471 GFF4390 GFF4391 - Acriflavin resistance protein, at 20,468 to 23,791 GFF4391 GFF4392 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 23,784 to 25,268 GFF4392 GFF4393 - Uncharacterized ABC1 family protein XCC_1720, at 25,278 to 27,026 GFF4393
Locus Name Description Strand Phenotype
GFF4383 hypothetical protein + cofit
GFF4384 Plasmid replication initiator protein + insig.
GFF4385 ParA-like protein + insig.
GFF4386 FIG00457034: hypothetical protein + insig.
GFF4387 Glycosidases + insig.
GFF4388 Type IV secretory pathway, protease TraF + insig.
GFF4389 Type IV secretory pathway, VirD2 components (relaxase) + insig.
GFF4390 Membrane-fusion protein + insig.
GFF4391 Acriflavin resistance protein + insig.
GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein + insig.
GFF4393 Uncharacterized ABC1 family protein XCC_1720 + insig.

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