Gene info for PS417_22140 in Pseudomonas simiae WCS417

Updated annotation (from data): glucose/xylose ABC transporter, permease component 2
Rationale: Specifically important for utilization of D-glucose 6-phosphate and D-xylose. Glucokinase (PS417_22685) is important for glucose-6-phosphate utilization, which implies that it is hydrolyzed to glucose before uptake.
Original annotation: sugar ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 4,796,478 to 4,797,386
See nucleotide sequence around PS417_22140 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586033018, uniprot: A0A1N7U818

Nearby Genes

500 ntPS417_22115 and PS417_22120 are separated by 142 nucleotidesPS417_22120 and PS417_22125 are separated by 102 nucleotidesPS417_22125 and PS417_22130 are separated by 85 nucleotidesPS417_22130 and PS417_22135 are separated by 2 nucleotidesPS417_22135 and PS417_22140 overlap by 8 nucleotidesPS417_22140 and PS417_22145 are separated by 180 nucleotidesPS417_22145 and PS417_22150 are separated by 104 nucleotidesPS417_22150 and PS417_22155 are separated by 115 nucleotidesPS417_22155 and PS417_22160 are separated by 114 nucleotidesPS417_22160 and PS417_22165 are separated by 52 nucleotides PS417_22115: PS417_22115 - transcriptional regulator, at 4,791,085 to 4,791,954 _22115 PS417_22120: PS417_22120 - aldose epimerase, at 4,792,097 to 4,792,942 _22120 PS417_22125: PS417_22125 - porin, at 4,793,045 to 4,794,391 _22125 PS417_22130: PS417_22130 - glucose/xylose ABC transporter, ATPase component (from data), at 4,794,477 to 4,795,637 _22130 PS417_22135: PS417_22135 - glucose/xylose ABC transporter, permease component 1 (from data), at 4,795,640 to 4,796,485 _22135 PS417_22140: PS417_22140 - glucose/xylose ABC transporter, permease component 2 (from data), at 4,796,478 to 4,797,386 _22140 PS417_22145: PS417_22145 - glucose/xylose ABC transporter, periplasmic substrate-binding component (from data), at 4,797,567 to 4,798,853 _22145 PS417_22150: PS417_22150 - D-mannose isomerase (EC 5.3.1.7) (from data), at 4,798,958 to 4,800,217 _22150 PS417_22155: PS417_22155 - ATPase, at 4,800,333 to 4,801,178 _22155 PS417_22160: PS417_22160 - 3-beta hydroxysteroid dehydrogenase, at 4,801,293 to 4,802,291 _22160 PS417_22165: PS417_22165 - LysR family transcriptional regulator, at 4,802,344 to 4,803,237 _22165
Locus Name Description Strand Phenotype
PS417_22115 PS417_22115 transcriptional regulator + strong
PS417_22120 PS417_22120 aldose epimerase - sig.
PS417_22125 PS417_22125 porin - strong
PS417_22130 PS417_22130 glucose/xylose ABC transporter, ATPase component (from data) - strong
PS417_22135 PS417_22135 glucose/xylose ABC transporter, permease component 1 (from data) - strong
PS417_22140 PS417_22140 glucose/xylose ABC transporter, permease component 2 (from data) - strong
PS417_22145 PS417_22145 glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) - strong
PS417_22150 PS417_22150 D-mannose isomerase (EC 5.3.1.7) (from data) - strong
PS417_22155 PS417_22155 ATPase - insig.
PS417_22160 PS417_22160 3-beta hydroxysteroid dehydrogenase - sig.
PS417_22165 PS417_22165 LysR family transcriptional regulator - insig.

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