Gene info for PS417_22065 in Pseudomonas simiae WCS417

Updated annotation (from data): Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Rationale: Specifically important for utilizing Sodium octanoate. Automated validation from mutant phenotype: the predicted function (ACYLCOASYN-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: long-chain fatty acid--CoA ligase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 4,780,320 to 4,782,011
See nucleotide sequence around PS417_22065 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586033003, uniprot: A0A1N7U5P1

Nearby Genes

500 ntPS417_22040 and PS417_22045 are separated by 127 nucleotidesPS417_22045 and PS417_22050 are separated by 3 nucleotidesPS417_22050 and PS417_22055 are separated by 176 nucleotidesPS417_22055 and PS417_22060 are separated by 199 nucleotidesPS417_22060 and PS417_22065 are separated by 114 nucleotidesPS417_22065 and PS417_22070 are separated by 395 nucleotidesPS417_22070 and PS417_22075 are separated by 210 nucleotidesPS417_22075 and PS417_22080 are separated by 57 nucleotidesPS417_22080 and PS417_22085 are separated by 55 nucleotidesPS417_22085 and PS417_22090 are separated by 205 nucleotides PS417_22040: PS417_22040 - GNAT family acetyltransferase, at 4,777,199 to 4,777,639 _22040 PS417_22045: PS417_22045 - peptide deformylase, at 4,777,767 to 4,778,306 _22045 PS417_22050: PS417_22050 - ribonuclease BN, at 4,778,310 to 4,779,260 _22050 PS417_22055: PS417_22055 - hypothetical protein, at 4,779,437 to 4,779,628 _22055 PS417_22060: PS417_22060 - hypothetical protein, at 4,779,828 to 4,780,205 _22060 PS417_22065: PS417_22065 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data), at 4,780,320 to 4,782,011 _22065 PS417_22070: PS417_22070 - long-chain fatty acid--CoA ligase, at 4,782,407 to 4,784,095 _22070 PS417_22075: PS417_22075 - alpha/beta hydrolase, at 4,784,306 to 4,785,250 _22075 PS417_22080: PS417_22080 - 3-hydroxybutyryl-CoA dehydratase, at 4,785,308 to 4,785,778 _22080 PS417_22085: PS417_22085 - aldehyde dehydrogenase, at 4,785,834 to 4,786,301 _22085 PS417_22090: PS417_22090 - hypothetical protein, at 4,786,507 to 4,786,743 _22090
Locus Name Description Strand Phenotype
PS417_22040 PS417_22040 GNAT family acetyltransferase + insig.
PS417_22045 PS417_22045 peptide deformylase - insig.
PS417_22050 PS417_22050 ribonuclease BN - strong
PS417_22055 PS417_22055 hypothetical protein - no data
PS417_22060 PS417_22060 hypothetical protein + insig.
PS417_22065 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) - strong
PS417_22070 PS417_22070 long-chain fatty acid--CoA ligase - insig.
PS417_22075 PS417_22075 alpha/beta hydrolase + insig.
PS417_22080 PS417_22080 3-hydroxybutyryl-CoA dehydratase + no data
PS417_22085 PS417_22085 aldehyde dehydrogenase - insig.
PS417_22090 PS417_22090 hypothetical protein + no data

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