Gene info for GFF4261 in Variovorax sp. SCN45

Annotation: RNA polymerase ECF-type sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000009, + strand, nucleotides 179,200 to 179,751
See nucleotide sequence around GFF4261 or for all of scaffold scaffold00000009

Nearby Genes

500 ntGFF4256 and GFF4257 are separated by 16 nucleotidesGFF4257 and GFF4258 overlap by 8 nucleotidesGFF4258 and GFF4259 are separated by 34 nucleotidesGFF4259 and GFF4260 are separated by 154 nucleotidesGFF4260 and GFF4261 are separated by 160 nucleotidesGFF4261 and GFF4262 overlap by 4 nucleotidesGFF4262 and GFF4263 are separated by 126 nucleotidesGFF4263 and GFF4264 are separated by 109 nucleotidesGFF4264 and GFF4265 are separated by 27 nucleotidesGFF4265 and GFF4266 are separated by 63 nucleotides GFF4256 - Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82), at 171,515 to 172,588 GFF4256 GFF4257 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 172,605 to 173,741 GFF4257 GFF4258 - no description, at 173,734 to 174,105 GFF4258 GFF4259 - Transcriptional regulator, DeoR family, at 174,140 to 174,862 GFF4259 GFF4260 - hypothetical protein, at 175,017 to 179,039 GFF4260 GFF4261 - RNA polymerase ECF-type sigma factor, at 179,200 to 179,751 GFF4261 GFF4262 - hypothetical protein, at 179,748 to 180,893 GFF4262 GFF4263 - TonB-dependent siderophore receptor, at 181,020 to 183,482 GFF4263 GFF4264 - surface antigen gene, at 183,592 to 185,025 GFF4264 GFF4265 - hypothetical protein, at 185,053 to 186,315 GFF4265 GFF4266 - Alkanal monooxygenase alpha chain (EC 1.14.14.3), at 186,379 to 187,401 GFF4266
Locus Name Description Strand Phenotype
GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) + insig.
GFF4257 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF4258 no description - insig.
GFF4259 Transcriptional regulator, DeoR family - insig.
GFF4260 hypothetical protein + insig.
GFF4261 RNA polymerase ECF-type sigma factor + insig.
GFF4262 hypothetical protein + insig.
GFF4263 TonB-dependent siderophore receptor + insig.
GFF4264 surface antigen gene + insig.
GFF4265 hypothetical protein - insig.
GFF4266 Alkanal monooxygenase alpha chain (EC 1.14.14.3) - insig.

Or browse nearby genes

Or see the comparative fitness browser