Gene info for PS417_21710 in Pseudomonas simiae WCS417

Updated annotation (from data): Succinylornithine transaminase (EC 2.6.1.81)
Rationale: Specifically important for: L-Arginine. succinylornithine transaminase is involved in L-arginine degradation via N-succinylarginine. Also this gene is cofit with other putative steps in that pathway (N-succinylarginine dihydrolase, succinylglutamate-semialdehyde dehydrogenase, succinylglutamate desuccinylase). In contrast, neither of the functions proposed by KEGG have an obvious relationship to arginine catabolism. (SEED_correct)
Original annotation: acetylornithine aminotransferase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 4,709,518 to 4,710,738
See nucleotide sequence around PS417_21710 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032933, uniprot: A0A1N7U5H6

Nearby Genes

500 ntPS417_21685 and PS417_21690 are separated by 39 nucleotidesPS417_21690 and PS417_21695 are separated by 152 nucleotidesPS417_21695 and PS417_21700 overlap by 1 nucleotidesPS417_21700 and PS417_21705 are separated by 51 nucleotidesPS417_21705 and PS417_21710 are separated by 245 nucleotidesPS417_21710 and PS417_21715 are separated by 309 nucleotidesPS417_21715 and PS417_21720 are separated by 14 nucleotidesPS417_21720 and PS417_21725 are separated by 246 nucleotidesPS417_21725 and PS417_21730 are separated by 27 nucleotidesPS417_21730 and PS417_21735 are separated by 1 nucleotides PS417_21685: PS417_21685 - topoisomerase II, at 4,703,881 to 4,704,171 _21685 PS417_21690: PS417_21690 - N-succinylarginine dihydrolase, at 4,704,211 to 4,705,557 _21690 PS417_21695: PS417_21695 - succinylglutamate-semialdehyde dehydrogenase, at 4,705,710 to 4,707,176 _21695 PS417_21700: PS417_21700 - arginine N-succinyltransferase, at 4,707,176 to 4,708,201 _21700 PS417_21705: PS417_21705 - arginine N-succinyltransferase, at 4,708,253 to 4,709,272 _21705 PS417_21710: PS417_21710 - Succinylornithine transaminase (EC 2.6.1.81) (from data), at 4,709,518 to 4,710,738 _21710 PS417_21715: PS417_21715 - hypothetical protein, at 4,711,048 to 4,716,966 _21715 PS417_21720: PS417_21720 - AraC family transcriptional regulator, at 4,716,981 to 4,717,961 _21720 PS417_21725: PS417_21725 - amino acid transporter, at 4,718,208 to 4,718,972 _21725 PS417_21730: PS417_21730 - peptidase M14, at 4,719,000 to 4,720,112 _21730 PS417_21735: PS417_21735 - ABC transporter for L-Arginine, permease component 2 (from data), at 4,720,114 to 4,720,812 _21735
Locus Name Description Strand Phenotype
PS417_21685 PS417_21685 topoisomerase II - no data
PS417_21690 PS417_21690 N-succinylarginine dihydrolase - strong
PS417_21695 PS417_21695 succinylglutamate-semialdehyde dehydrogenase - strong
PS417_21700 PS417_21700 arginine N-succinyltransferase - strong
PS417_21705 PS417_21705 arginine N-succinyltransferase - strong
PS417_21710 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) - strong
PS417_21715 PS417_21715 hypothetical protein + insig.
PS417_21720 PS417_21720 AraC family transcriptional regulator - no data
PS417_21725 PS417_21725 amino acid transporter - sig.
PS417_21730 PS417_21730 peptidase M14 - insig.
PS417_21735 PS417_21735 ABC transporter for L-Arginine, permease component 2 (from data) - strong

Or browse nearby genes

Or see the comparative fitness browser