Gene info for GFF4004 in Pseudomonas sp. DMC3

Annotation: Ribosomal large subunit pseudouridine synthase D
Type 1: Protein-coding gene
Located on scaffold scaffold00000009, + strand, nucleotides 264,007 to 264,969
See nucleotide sequence around GFF4004 or for all of scaffold scaffold00000009

Nearby Genes

500 ntGFF3999 and GFF4000 are separated by 88 nucleotidesGFF4000 and GFF4001 overlap by 4 nucleotidesGFF4001 and GFF4002 overlap by 11 nucleotidesGFF4002 and GFF4003 are separated by 127 nucleotidesGFF4003 and GFF4004 are separated by 151 nucleotidesGFF4004 and GFF4005 overlap by 4 nucleotidesGFF4005 and GFF4006 are separated by 131 nucleotidesGFF4006 and GFF4007 are separated by 875 nucleotidesGFF4007 and GFF4008 are separated by 208 nucleotidesGFF4008 and GFF4009 are separated by 63 nucleotides GFF3999 - Glycine oxidase, at 258,367 to 259,467 GFF3999 GFF4000 - Regulatory protein AtoC, at 259,556 to 260,902 GFF4000 GFF4001 - Adaptive-response sensory-kinase SasA, at 260,899 to 262,488 GFF4001 GFF4002 - hypothetical protein, at 262,478 to 262,711 GFF4002 GFF4003 - Outer membrane protein assembly factor BamD, at 262,839 to 263,855 GFF4003 GFF4004 - Ribosomal large subunit pseudouridine synthase D, at 264,007 to 264,969 GFF4004 GFF4005 - Polyphenol oxidase, at 264,966 to 265,688 GFF4005 GFF4006 - Chaperone protein ClpB, at 265,820 to 268,384 GFF4006 GFF4007 - hypothetical protein, at 269,260 to 270,885 GFF4007 GFF4008 - NADH dehydrogenase, at 271,094 to 272,392 GFF4008 GFF4009 - hypothetical protein, at 272,456 to 272,629 GFF4009
Locus Name Description Strand Phenotype
GFF3999 Glycine oxidase + insig.
GFF4000 Regulatory protein AtoC - cofit
GFF4001 Adaptive-response sensory-kinase SasA - cofit
GFF4002 hypothetical protein - no data
GFF4003 Outer membrane protein assembly factor BamD - no data
GFF4004 Ribosomal large subunit pseudouridine synthase D + cofit
GFF4005 Polyphenol oxidase + insig.
GFF4006 Chaperone protein ClpB + cofit
GFF4007 hypothetical protein + cofit
GFF4008 NADH dehydrogenase - insig.
GFF4009 hypothetical protein - insig.

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