Gene info for GFF399 in Variovorax sp. SCN45

Annotation: 3'-to-5' exoribonuclease RNase R
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, - strand, nucleotides 431,217 to 433,538
See nucleotide sequence around GFF399 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF394 and GFF395 are separated by 53 nucleotidesGFF395 and GFF396 overlap by 11 nucleotidesGFF396 and GFF397 are separated by 41 nucleotidesGFF397 and GFF398 are separated by 13 nucleotidesGFF398 and GFF399 are separated by 59 nucleotidesGFF399 and GFF400 are separated by 550 nucleotidesGFF400 and GFF401 are separated by 78 nucleotidesGFF401 and GFF402 are separated by 74 nucleotidesGFF402 and GFF403 are separated by 395 nucleotidesGFF403 and GFF404 are separated by 10 nucleotides GFF394 - Putative amidase R03093, at 425,827 to 427,152 GFF394 GFF395 - D-amino acid dehydrogenase (EC 1.4.99.6), at 427,206 to 428,459 GFF395 GFF396 - hypothetical protein, at 428,449 to 428,877 GFF396 GFF397 - NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136), at 428,919 to 430,379 GFF397 GFF398 - Putative oxidoreductase, at 430,393 to 431,157 GFF398 GFF399 - 3'-to-5' exoribonuclease RNase R, at 431,217 to 433,538 GFF399 GFF400 - Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4), at 434,089 to 435,495 GFF400 GFF401 - PhbF, at 435,574 to 436,134 GFF401 GFF402 - hypothetical protein, at 436,209 to 436,559 GFF402 GFF403 - Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I, at 436,955 to 439,195 GFF403 GFF404 - Hydrolase, alpha/beta fold family, at 439,206 to 440,198 GFF404
Locus Name Description Strand Phenotype
GFF394 Putative amidase R03093 + insig.
GFF395 D-amino acid dehydrogenase (EC 1.4.99.6) + cofit
GFF396 hypothetical protein - insig.
GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) + insig.
GFF398 Putative oxidoreductase - insig.
GFF399 3'-to-5' exoribonuclease RNase R - cofit
GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) - insig.
GFF401 PhbF - cofit
GFF402 hypothetical protein - insig.
GFF403 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I - cofit
GFF404 Hydrolase, alpha/beta fold family - insig.

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