Gene info for GFF3978 in Variovorax sp. SCN45

Annotation: ABC-type branched-chain amino acid transport systems, periplasmic component
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 181,348 to 182,493
See nucleotide sequence around GFF3978 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3973 and GFF3974 overlap by 4 nucleotidesGFF3974 and GFF3975 are separated by 16 nucleotidesGFF3975 and GFF3976 overlap by 4 nucleotidesGFF3976 and GFF3977 are separated by 49 nucleotidesGFF3977 and GFF3978 are separated by 1 nucleotidesGFF3978 and GFF3979 are separated by 28 nucleotidesGFF3979 and GFF3980 overlap by 4 nucleotidesGFF3980 and GFF3981 are separated by 43 nucleotidesGFF3981 and GFF3982 are separated by 34 nucleotidesGFF3982 and GFF3983 overlap by 4 nucleotides GFF3973 - FIG01198345: hypothetical protein, at 176,145 to 177,320 GFF3973 GFF3974 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 177,317 to 178,570 GFF3974 GFF3975 - Metal-dependent hydrolase, at 178,587 to 179,399 GFF3975 GFF3976 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 179,396 to 180,130 GFF3976 GFF3977 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 180,180 to 181,346 GFF3977 GFF3978 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 181,348 to 182,493 GFF3978 GFF3979 - 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-), at 182,522 to 183,847 GFF3979 GFF3980 - 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-), at 183,844 to 184,308 GFF3980 GFF3981 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 184,352 to 185,515 GFF3981 GFF3982 - Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1), at 185,550 to 186,605 GFF3982 GFF3983 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 186,602 to 188,389 GFF3983
Locus Name Description Strand Phenotype
GFF3973 FIG01198345: hypothetical protein + insig.
GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family + cofit
GFF3975 Metal-dependent hydrolase + strong
GFF3976 Oxidoreductase, short-chain dehydrogenase/reductase family + insig.
GFF3977 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component + insig.
GFF3979 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) + insig.
GFF3980 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) + insig.
GFF3981 ABC-type branched-chain amino acid transport systems, periplasmic component + insig.
GFF3982 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) + insig.
GFF3983 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.

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