Gene info for GFF3972 in Variovorax sp. SCN45

Annotation: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 174,520 to 176,148
See nucleotide sequence around GFF3972 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3967 and GFF3968 are separated by 4 nucleotidesGFF3968 and GFF3969 are separated by 13 nucleotidesGFF3969 and GFF3970 are separated by 20 nucleotidesGFF3970 and GFF3971 overlap by 1 nucleotidesGFF3971 and GFF3972 are separated by 14 nucleotidesGFF3972 and GFF3973 overlap by 4 nucleotidesGFF3973 and GFF3974 overlap by 4 nucleotidesGFF3974 and GFF3975 are separated by 16 nucleotidesGFF3975 and GFF3976 overlap by 4 nucleotidesGFF3976 and GFF3977 are separated by 49 nucleotides GFF3967 - Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8), at 167,972 to 170,164 GFF3967 GFF3968 - Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8), at 170,169 to 171,674 GFF3968 GFF3969 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 171,688 to 172,680 GFF3969 GFF3970 - Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13), at 172,701 to 174,014 GFF3970 GFF3971 - Aromatic-ring-hydroxylating dioxygenase, beta subunit (EC 1.14.12.3), at 174,014 to 174,505 GFF3971 GFF3972 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 174,520 to 176,148 GFF3972 GFF3973 - FIG01198345: hypothetical protein, at 176,145 to 177,320 GFF3973 GFF3974 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 177,317 to 178,570 GFF3974 GFF3975 - Metal-dependent hydrolase, at 178,587 to 179,399 GFF3975 GFF3976 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 179,396 to 180,130 GFF3976 GFF3977 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 180,180 to 181,346 GFF3977
Locus Name Description Strand Phenotype
GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) + insig.
GFF3968 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) + insig.
GFF3969 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) + sig.
GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) + insig.
GFF3971 Aromatic-ring-hydroxylating dioxygenase, beta subunit (EC 1.14.12.3) + no data
GFF3972 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) + insig.
GFF3973 FIG01198345: hypothetical protein + insig.
GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family + cofit
GFF3975 Metal-dependent hydrolase + strong
GFF3976 Oxidoreductase, short-chain dehydrogenase/reductase family + insig.
GFF3977 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) + insig.

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