Gene info for GFF3900 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, GntR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, - strand, nucleotides 101,850 to 102,608
See nucleotide sequence around GFF3900 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3895 and GFF3896 are separated by 29 nucleotidesGFF3896 and GFF3897 are separated by 16 nucleotidesGFF3897 and GFF3898 are separated by 7 nucleotidesGFF3898 and GFF3899 are separated by 13 nucleotidesGFF3899 and GFF3900 are separated by 226 nucleotidesGFF3900 and GFF3901 are separated by 184 nucleotidesGFF3901 and GFF3902 are separated by 12 nucleotidesGFF3902 and GFF3903 overlap by 4 nucleotidesGFF3903 and GFF3904 are separated by 34 nucleotidesGFF3904 and GFF3905 are separated by 80 nucleotides GFF3895 - Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin, at 97,920 to 98,234 GFF3895 GFF3896 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.5.1), at 98,264 to 98,965 GFF3896 GFF3897 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1), at 98,982 to 100,790 GFF3897 GFF3898 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 100,798 to 101,163 GFF3898 GFF3899 - Succinate dehydrogenase cytochrome b-556 subunit, at 101,177 to 101,623 GFF3899 GFF3900 - Transcriptional regulator, GntR family, at 101,850 to 102,608 GFF3900 GFF3901 - Malate dehydrogenase (EC 1.1.1.37), at 102,793 to 103,779 GFF3901 GFF3902 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 103,792 to 104,583 GFF3902 GFF3903 - Similar to citrate lyase beta chain, 10, at 104,580 to 105,581 GFF3903 GFF3904 - Probable signal peptide protein, at 105,616 to 106,188 GFF3904 GFF3905 - Aconitate hydratase 2 (EC 4.2.1.3), at 106,269 to 108,854 GFF3905
Locus Name Description Strand Phenotype
GFF3895 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin - no data
GFF3896 Succinate dehydrogenase iron-sulfur protein (EC 1.3.5.1) - no data
GFF3897 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) - no data
GFF3898 Succinate dehydrogenase hydrophobic membrane anchor protein - no data
GFF3899 Succinate dehydrogenase cytochrome b-556 subunit - no data
GFF3900 Transcriptional regulator, GntR family - sig.
GFF3901 Malate dehydrogenase (EC 1.1.1.37) + no data
GFF3902 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) + insig.
GFF3903 Similar to citrate lyase beta chain, 10 + insig.
GFF3904 Probable signal peptide protein + insig.
GFF3905 Aconitate hydratase 2 (EC 4.2.1.3) + strong

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