Gene info for GFF3893 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 91,466 to 96,505
See nucleotide sequence around GFF3893 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3888 and GFF3889 are separated by 36 nucleotidesGFF3889 and GFF3890 are separated by 16 nucleotidesGFF3890 and GFF3891 are separated by 49 nucleotidesGFF3891 and GFF3892 overlap by 4 nucleotidesGFF3892 and GFF3893 are separated by 106 nucleotidesGFF3893 and GFF3894 are separated by 79 nucleotidesGFF3894 and GFF3895 are separated by 24 nucleotidesGFF3895 and GFF3896 are separated by 29 nucleotidesGFF3896 and GFF3897 are separated by 16 nucleotidesGFF3897 and GFF3898 are separated by 7 nucleotides GFF3888 - 3-isopropylmalate dehydrogenase (EC 1.1.1.85), at 87,033 to 88,121 GFF3888 GFF3889 - 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33), at 88,158 to 88,814 GFF3889 GFF3890 - 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33), at 88,831 to 90,252 GFF3890 GFF3891 - Transcriptional regulator, LysR family, at 90,302 to 91,246 GFF3891 GFF3892 - no description, at 91,243 to 91,359 GFF3892 GFF3893 - hypothetical protein, at 91,466 to 96,505 GFF3893 GFF3894 - Citrate synthase (si) (EC 2.3.3.1), at 96,585 to 97,895 GFF3894 GFF3895 - Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin, at 97,920 to 98,234 GFF3895 GFF3896 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.5.1), at 98,264 to 98,965 GFF3896 GFF3897 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1), at 98,982 to 100,790 GFF3897 GFF3898 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 100,798 to 101,163 GFF3898
Locus Name Description Strand Phenotype
GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) - strong
GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) - cofit
GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) - strong
GFF3891 Transcriptional regulator, LysR family - cofit
GFF3892 no description - insig.
GFF3893 hypothetical protein + insig.
GFF3894 Citrate synthase (si) (EC 2.3.3.1) - no data
GFF3895 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin - no data
GFF3896 Succinate dehydrogenase iron-sulfur protein (EC 1.3.5.1) - no data
GFF3897 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) - no data
GFF3898 Succinate dehydrogenase hydrophobic membrane anchor protein - no data

Or browse nearby genes

Or see the comparative fitness browser