Gene info for GFF3858 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: TcuR: regulates tcuABC genes used in utilization of tricarballylate
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, - strand, nucleotides 770,770 to 771,726
See nucleotide sequence around GFF3858 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF3854 and GFF5789 are separated by 36 nucleotidesGFF5789 and GFF3855 are separated by 183 nucleotidesGFF3855 and GFF3856 are separated by 143 nucleotidesGFF3856 and GFF3857 are separated by 37 nucleotidesGFF3857 and GFF3858 are separated by 122 nucleotidesGFF3858 and GFF3859 are separated by 75 nucleotidesGFF3859 and GFF3860 are separated by 104 nucleotidesGFF3860 and GFF3861 are separated by 17 nucleotidesGFF3861 and GFF3862 are separated by 44 nucleotidesGFF3862 and GFF3863 are separated by 0 nucleotides GFF3854 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 764,980 to 766,899 GFF3854 GFF5789 - tRNA-His-GTG, at 766,936 to 767,008 GFF5789 GFF3855 - hypothetical protein, at 767,192 to 767,494 GFF3855 GFF3856 - Tricarboxylate transport protein TctC, at 767,638 to 768,621 GFF3856 GFF3857 - 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34), at 768,659 to 770,647 GFF3857 GFF3858 - TcuR: regulates tcuABC genes used in utilization of tricarballylate, at 770,770 to 771,726 GFF3858 GFF3859 - probable ring-cleaving dioxygenase protein, at 771,802 to 772,644 GFF3859 GFF3860 - Transcriptional regulator, IclR family, at 772,749 to 773,540 GFF3860 GFF3861 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 773,558 to 774,064 GFF3861 GFF3862 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 774,109 to 775,098 GFF3862 GFF3863 - TRAP-type C4-dicarboxylate transport system, small permease component, at 775,099 to 775,614 GFF3863
Locus Name Description Strand Phenotype
GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) + insig.
GFF5789 tRNA-His-GTG + no data
GFF3855 hypothetical protein + no data
GFF3856 Tricarboxylate transport protein TctC - insig.
GFF3857 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - insig.
GFF3858 TcuR: regulates tcuABC genes used in utilization of tricarballylate - insig.
GFF3859 probable ring-cleaving dioxygenase protein - insig.
GFF3860 Transcriptional regulator, IclR family - insig.
GFF3861 3-dehydroquinate dehydratase II (EC 4.2.1.10) + no data
GFF3862 TRAP-type C4-dicarboxylate transport system, periplasmic component + insig.
GFF3863 TRAP-type C4-dicarboxylate transport system, small permease component + cofit

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