Gene info for GFF3850 in Variovorax sp. SCN45

Annotation: Periplasmic serine proteases (ClpP class)
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 50,102 to 51,118
See nucleotide sequence around GFF3850 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3845 and GFF3846 are separated by 6 nucleotidesGFF3846 and GFF3847 are separated by 272 nucleotidesGFF3847 and GFF3848 overlap by 8 nucleotidesGFF3848 and GFF3849 are separated by 21 nucleotidesGFF3849 and GFF3850 are separated by 1 nucleotidesGFF3850 and GFF3851 are separated by 4 nucleotidesGFF3851 and GFF3852 are separated by 2 nucleotidesGFF3852 and GFF3853 overlap by 4 nucleotidesGFF3853 and GFF3854 are separated by 82 nucleotidesGFF3854 and GFF3855 are separated by 146 nucleotides GFF3845 - Ribonuclease E (EC 3.1.26.12), at 44,185 to 47,391 GFF3845 GFF3846 - hypothetical protein, at 47,398 to 47,661 GFF3846 GFF3847 - LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24), at 47,934 to 49,046 GFF3847 GFF3848 - Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C, at 49,039 to 49,710 GFF3848 GFF3849 - Iron-sulfur cluster-binding protein, Rieske family, at 49,732 to 50,100 GFF3849 GFF3850 - Periplasmic serine proteases (ClpP class), at 50,102 to 51,118 GFF3850 GFF3851 - Uncharacterized MFS-type transporter, at 51,123 to 52,274 GFF3851 GFF3852 - Tetrapyrrole methylase family protein, at 52,277 to 53,038 GFF3852 GFF3853 - Septum formation protein Maf, at 53,035 to 53,616 GFF3853 GFF3854 - FIG01269488: protein, clustered with ribosomal protein L32p, at 53,699 to 54,268 GFF3854 GFF3855 - LSU ribosomal protein L32p @ LSU ribosomal protein L32p, zinc-independent, at 54,415 to 54,597 GFF3855
Locus Name Description Strand Phenotype
GFF3845 Ribonuclease E (EC 3.1.26.12) - cofit
GFF3846 hypothetical protein + no data
GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) + insig.
GFF3848 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C + insig.
GFF3849 Iron-sulfur cluster-binding protein, Rieske family + insig.
GFF3850 Periplasmic serine proteases (ClpP class) + insig.
GFF3851 Uncharacterized MFS-type transporter - insig.
GFF3852 Tetrapyrrole methylase family protein - insig.
GFF3853 Septum formation protein Maf - no data
GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p + insig.
GFF3855 LSU ribosomal protein L32p @ LSU ribosomal protein L32p, zinc-independent + no data

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