Gene info for GFF3848 in Variovorax sp. SCN45

Annotation: Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 49,039 to 49,710
See nucleotide sequence around GFF3848 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3843 and GFF3844 are separated by 108 nucleotidesGFF3844 and GFF3845 are separated by 47 nucleotidesGFF3845 and GFF3846 are separated by 6 nucleotidesGFF3846 and GFF3847 are separated by 272 nucleotidesGFF3847 and GFF3848 overlap by 8 nucleotidesGFF3848 and GFF3849 are separated by 21 nucleotidesGFF3849 and GFF3850 are separated by 1 nucleotidesGFF3850 and GFF3851 are separated by 4 nucleotidesGFF3851 and GFF3852 are separated by 2 nucleotidesGFF3852 and GFF3853 overlap by 4 nucleotides GFF3843 - Uncharacterized MFS-type transporter, at 41,594 to 43,162 GFF3843 GFF3844 - Transcriptional regulator, LysR family, at 43,271 to 44,137 GFF3844 GFF3845 - Ribonuclease E (EC 3.1.26.12), at 44,185 to 47,391 GFF3845 GFF3846 - hypothetical protein, at 47,398 to 47,661 GFF3846 GFF3847 - LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24), at 47,934 to 49,046 GFF3847 GFF3848 - Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C, at 49,039 to 49,710 GFF3848 GFF3849 - Iron-sulfur cluster-binding protein, Rieske family, at 49,732 to 50,100 GFF3849 GFF3850 - Periplasmic serine proteases (ClpP class), at 50,102 to 51,118 GFF3850 GFF3851 - Uncharacterized MFS-type transporter, at 51,123 to 52,274 GFF3851 GFF3852 - Tetrapyrrole methylase family protein, at 52,277 to 53,038 GFF3852 GFF3853 - Septum formation protein Maf, at 53,035 to 53,616 GFF3853
Locus Name Description Strand Phenotype
GFF3843 Uncharacterized MFS-type transporter - insig.
GFF3844 Transcriptional regulator, LysR family + insig.
GFF3845 Ribonuclease E (EC 3.1.26.12) - cofit
GFF3846 hypothetical protein + no data
GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) + insig.
GFF3848 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C + insig.
GFF3849 Iron-sulfur cluster-binding protein, Rieske family + insig.
GFF3850 Periplasmic serine proteases (ClpP class) + insig.
GFF3851 Uncharacterized MFS-type transporter - insig.
GFF3852 Tetrapyrrole methylase family protein - insig.
GFF3853 Septum formation protein Maf - no data

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