Gene info for GFF3842 in Variovorax sp. SCN45

Annotation: Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives)
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 40,304 to 41,587
See nucleotide sequence around GFF3842 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3837 and GFF3838 are separated by 166 nucleotidesGFF3838 and GFF3839 are separated by 115 nucleotidesGFF3839 and GFF3840 are separated by 16 nucleotidesGFF3840 and GFF3841 overlap by 4 nucleotidesGFF3841 and GFF3842 are separated by 7 nucleotidesGFF3842 and GFF3843 are separated by 6 nucleotidesGFF3843 and GFF3844 are separated by 108 nucleotidesGFF3844 and GFF3845 are separated by 47 nucleotidesGFF3845 and GFF3846 are separated by 6 nucleotidesGFF3846 and GFF3847 are separated by 272 nucleotides GFF3837 - no description, at 34,181 to 34,399 GFF3837 GFF3838 - Phosphoenolpyruvate carboxylase (EC 4.1.1.31), at 34,566 to 37,409 GFF3838 GFF3839 - Porphobilinogen deaminase (EC 2.5.1.61), at 37,525 to 38,418 GFF3839 GFF3840 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 38,435 to 39,205 GFF3840 GFF3841 - Uncharacterized protein EC-HemX, at 39,202 to 40,296 GFF3841 GFF3842 - Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives), at 40,304 to 41,587 GFF3842 GFF3843 - Uncharacterized MFS-type transporter, at 41,594 to 43,162 GFF3843 GFF3844 - Transcriptional regulator, LysR family, at 43,271 to 44,137 GFF3844 GFF3845 - Ribonuclease E (EC 3.1.26.12), at 44,185 to 47,391 GFF3845 GFF3846 - hypothetical protein, at 47,398 to 47,661 GFF3846 GFF3847 - LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24), at 47,934 to 49,046 GFF3847
Locus Name Description Strand Phenotype
GFF3837 no description - no data
GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) - strong
GFF3839 Porphobilinogen deaminase (EC 2.5.1.61) + no data
GFF3840 Uroporphyrinogen-III synthase (EC 4.2.1.75) + no data
GFF3841 Uncharacterized protein EC-HemX + sig.
GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) + cofit
GFF3843 Uncharacterized MFS-type transporter - insig.
GFF3844 Transcriptional regulator, LysR family + insig.
GFF3845 Ribonuclease E (EC 3.1.26.12) - cofit
GFF3846 hypothetical protein + no data
GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) + insig.

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