Gene info for GFF3827 in Variovorax sp. SCN45

Annotation: UPF0118 membrane protein SMc00793
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, + strand, nucleotides 16,538 to 17,818
See nucleotide sequence around GFF3827 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3822 and GFF3823 are separated by 198 nucleotidesGFF3823 and GFF3824 are separated by 27 nucleotidesGFF3824 and GFF3825 are separated by 131 nucleotidesGFF3825 and GFF3826 overlap by 4 nucleotidesGFF3826 and GFF3827 overlap by 4 nucleotidesGFF3827 and GFF3828 are separated by 139 nucleotidesGFF3828 and GFF3829 are separated by 100 nucleotidesGFF3829 and GFF3830 overlap by 7 nucleotidesGFF3830 and GFF3831 are separated by 8 nucleotidesGFF3831 and GFF3832 are separated by 48 nucleotides GFF3822 - RND efflux system, membrane fusion protein, at 10,322 to 11,566 GFF3822 GFF3823 - FIG00581576: hypothetical protein, at 11,765 to 13,234 GFF3823 GFF3824 - Argininosuccinate lyase (EC 4.3.2.1), at 13,262 to 14,659 GFF3824 GFF3825 - Autolysin sensor kinase (EC 2.7.3.-), at 14,791 to 15,789 GFF3825 GFF3826 - Response regulator receiver:LytTr DNA-binding region, at 15,786 to 16,541 GFF3826 GFF3827 - UPF0118 membrane protein SMc00793, at 16,538 to 17,818 GFF3827 GFF3828 - hypothetical protein, at 17,958 to 20,318 GFF3828 GFF3829 - hypothetical protein, at 20,419 to 20,814 GFF3829 GFF3830 - Uncharacterized MFS-type transporter, at 20,808 to 22,064 GFF3830 GFF3831 - Acetyltransferase, GNAT family, at 22,073 to 22,597 GFF3831 GFF3832 - Transcriptional regulator KPN_02830, LysR family, at 22,646 to 23,569 GFF3832
Locus Name Description Strand Phenotype
GFF3822 RND efflux system, membrane fusion protein - insig.
GFF3823 FIG00581576: hypothetical protein - insig.
GFF3824 Argininosuccinate lyase (EC 4.3.2.1) - no data
GFF3825 Autolysin sensor kinase (EC 2.7.3.-) + strong
GFF3826 Response regulator receiver:LytTr DNA-binding region + strong
GFF3827 UPF0118 membrane protein SMc00793 + insig.
GFF3828 hypothetical protein + insig.
GFF3829 hypothetical protein + insig.
GFF3830 Uncharacterized MFS-type transporter - insig.
GFF3831 Acetyltransferase, GNAT family - insig.
GFF3832 Transcriptional regulator KPN_02830, LysR family + no data

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