Gene info for GFF3817 in Variovorax sp. SCN45

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, - strand, nucleotides 3,050 to 3,643
See nucleotide sequence around GFF3817 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3814 and GFF3815 are separated by 15 nucleotidesGFF3815 and GFF3816 are separated by 86 nucleotidesGFF3816 and GFF3817 are separated by 28 nucleotidesGFF3817 and GFF3818 are separated by 163 nucleotidesGFF3818 and GFF3819 are separated by 49 nucleotidesGFF3819 and GFF3820 are separated by 5 nucleotidesGFF3820 and GFF3821 overlap by 1 nucleotidesGFF3821 and GFF3822 are separated by 9 nucleotides GFF3814 - OpgC protein, at 233 to 1,375 GFF3814 GFF3815 - FIG00347597: hypothetical protein, at 1,391 to 2,164 GFF3815 GFF3816 - hypothetical protein, at 2,251 to 3,021 GFF3816 GFF3817 - RNA polymerase sigma factor, at 3,050 to 3,643 GFF3817 GFF3818 - hypothetical protein, at 3,807 to 4,346 GFF3818 GFF3819 - hypothetical protein, at 4,396 to 5,703 GFF3819 GFF3820 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 5,709 to 7,142 GFF3820 GFF3821 - RND efflux system, inner membrane transporter, at 7,142 to 10,312 GFF3821 GFF3822 - RND efflux system, membrane fusion protein, at 10,322 to 11,566 GFF3822
Locus Name Description Strand Phenotype
GFF3814 OpgC protein + insig.
GFF3815 FIG00347597: hypothetical protein - insig.
GFF3816 hypothetical protein - insig.
GFF3817 RNA polymerase sigma factor - insig.
GFF3818 hypothetical protein + insig.
GFF3819 hypothetical protein + insig.
GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein - insig.
GFF3821 RND efflux system, inner membrane transporter - insig.
GFF3822 RND efflux system, membrane fusion protein - insig.

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