Gene info for GFF3742 in Variovorax sp. SCN45

Annotation: Type IV pilus assembly ATPase component PilU
Type 1: Protein-coding gene
Located on scaffold scaffold00000007, - strand, nucleotides 238,082 to 239,218
See nucleotide sequence around GFF3742 or for all of scaffold scaffold00000007

Nearby Genes

500 ntGFF3737 and GFF3738 overlap by 4 nucleotidesGFF3738 and GFF3739 are separated by 29 nucleotidesGFF3739 and GFF3740 are separated by 87 nucleotidesGFF3740 and GFF3741 overlap by 4 nucleotidesGFF3741 and GFF3742 overlap by 4 nucleotidesGFF3742 and GFF3743 are separated by 32 nucleotidesGFF3743 and GFF3744 are separated by 51 nucleotidesGFF3744 and GFF3745 are separated by 25 nucleotidesGFF3745 and GFF3746 are separated by 10 nucleotidesGFF3746 and GFF3747 overlap by 4 nucleotides GFF3737 - DnaA initiator-associating protein DiaA, at 233,577 to 234,221 GFF3737 GFF3738 - Uncharacterized protein YraP, at 234,218 to 235,030 GFF3738 GFF3739 - 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), at 235,060 to 235,968 GFF3739 GFF3740 - Transcriptional regulator, MerR family, at 236,056 to 236,538 GFF3740 GFF3741 - Uncharacterized MFS-type transporter, at 236,535 to 238,085 GFF3741 GFF3742 - Type IV pilus assembly ATPase component PilU, at 238,082 to 239,218 GFF3742 GFF3743 - Twitching motility protein PilT, at 239,251 to 240,294 GFF3743 GFF3744 - Pyridoxal phosphate-containing protein YggS, at 240,346 to 241,047 GFF3744 GFF3745 - Uncharacterized UPF0721 integral membrane protein, at 241,073 to 241,813 GFF3745 GFF3746 - Probable NADH dehydrogenase/NAD(P)H nitroreductase, at 241,824 to 242,414 GFF3746 GFF3747 - putative esterase, at 242,411 to 243,253 GFF3747
Locus Name Description Strand Phenotype
GFF3737 DnaA initiator-associating protein DiaA + no data
GFF3738 Uncharacterized protein YraP + cofit
GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) - insig.
GFF3740 Transcriptional regulator, MerR family + insig.
GFF3741 Uncharacterized MFS-type transporter + insig.
GFF3742 Type IV pilus assembly ATPase component PilU - no data
GFF3743 Twitching motility protein PilT - strong
GFF3744 Pyridoxal phosphate-containing protein YggS + no data
GFF3745 Uncharacterized UPF0721 integral membrane protein - insig.
GFF3746 Probable NADH dehydrogenase/NAD(P)H nitroreductase - insig.
GFF3747 putative esterase - insig.

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