Gene info for PS417_19130 in Pseudomonas simiae WCS417

Updated annotation (from data): L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3)
Rationale: Specifically important for utilizing Sodium L-Lactate. Automated validation from mutant phenotype: the predicted function (1.1.2.3) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: lactate dehydrogenase
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 4,131,646 to 4,132,776
See nucleotide sequence around PS417_19130 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032430, uniprot: A0A1N7UEV1

Nearby Genes

500 ntPS417_19105 and PS417_19110 are separated by 82 nucleotidesPS417_19110 and PS417_19115 are separated by 90 nucleotidesPS417_19115 and PS417_19120 overlap by 9 nucleotidesPS417_19120 and PS417_19125 are separated by 60 nucleotidesPS417_19125 and PS417_19130 are separated by 101 nucleotidesPS417_19130 and PS417_19135 are separated by 484 nucleotidesPS417_19135 and PS417_19140 are separated by 21 nucleotidesPS417_19140 and PS417_19145 are separated by 46 nucleotidesPS417_19145 and PS417_19150 are separated by 71 nucleotidesPS417_19150 and PS417_19155 overlap by 8 nucleotides PS417_19105: PS417_19105 - hypothetical protein, at 4,129,476 to 4,129,697 _19105 PS417_19110: PS417_19110 - hypothetical protein, at 4,129,780 to 4,130,079 _19110 PS417_19115: PS417_19115 - hypothetical protein, at 4,130,170 to 4,130,520 _19115 PS417_19120: PS417_19120 - tRNA-Asn, at 4,130,512 to 4,130,587 _19120 PS417_19125: PS417_19125 - LysR family transcriptional regulator, at 4,130,648 to 4,131,544 _19125 PS417_19130: PS417_19130 - L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data), at 4,131,646 to 4,132,776 _19130 PS417_19135: PS417_19135 - DeoR faimly transcriptional regulator, at 4,133,261 to 4,134,187 _19135 PS417_19140: PS417_19140 - TenA family transcriptional regulator, at 4,134,209 to 4,135,009 _19140 PS417_19145: PS417_19145 - membrane protein, at 4,135,056 to 4,137,518 _19145 PS417_19150: PS417_19150 - ABC transporter ATP-binding protein, at 4,137,590 to 4,139,392 _19150 PS417_19155: PS417_19155 - DSBA oxidoreductase, at 4,139,385 to 4,140,020 _19155
Locus Name Description Strand Phenotype
PS417_19105 PS417_19105 hypothetical protein + insig.
PS417_19110 PS417_19110 hypothetical protein + insig.
PS417_19115 PS417_19115 hypothetical protein - insig.
PS417_19120 PS417_19120 tRNA-Asn - no data
PS417_19125 PS417_19125 LysR family transcriptional regulator - sig.
PS417_19130 PS417_19130 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) + strong
PS417_19135 PS417_19135 DeoR faimly transcriptional regulator + insig.
PS417_19140 PS417_19140 TenA family transcriptional regulator - insig.
PS417_19145 PS417_19145 membrane protein - strong
PS417_19150 PS417_19150 ABC transporter ATP-binding protein - insig.
PS417_19155 PS417_19155 DSBA oxidoreductase - insig.

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