Gene info for GFF3697 in Variovorax sp. SCN45

Annotation: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
Type 1: Protein-coding gene
Located on scaffold scaffold00000007, + strand, nucleotides 196,378 to 198,033
See nucleotide sequence around GFF3697 or for all of scaffold scaffold00000007

Nearby Genes

500 ntGFF3692 and GFF3693 are separated by 1 nucleotidesGFF3693 and GFF3694 are separated by 25 nucleotidesGFF3694 and GFF3695 are separated by 81 nucleotidesGFF3695 and GFF3696 are separated by 101 nucleotidesGFF3696 and GFF3697 overlap by 4 nucleotidesGFF3697 and GFF3698 overlap by 4 nucleotidesGFF3698 and GFF3699 are separated by 22 nucleotidesGFF3699 and GFF3700 are separated by 59 nucleotidesGFF3700 and GFF3701 are separated by 126 nucleotidesGFF3701 and GFF3702 are separated by 5 nucleotides GFF3692 - ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 191,731 to 192,693 GFF3692 GFF3693 - Oxidoreductase, at 192,695 to 193,858 GFF3693 GFF3694 - Phosphoesterase, PA-phosphatase related, at 193,884 to 194,597 GFF3694 GFF3695 - hypothetical protein, at 194,679 to 195,197 GFF3695 GFF3696 - mRNA 3-end processing factor, at 195,299 to 196,381 GFF3696 GFF3697 - ATP-dependent DNA ligase (EC 6.5.1.1) LigC, at 196,378 to 198,033 GFF3697 GFF3698 - ATP-dependent, 3'-5' DNA helicase with strand annealing activity, at 198,030 to 200,786 GFF3698 GFF3699 - Thioredoxin 2, at 200,809 to 201,258 GFF3699 GFF3700 - FIG006285: hypothetical protein, at 201,318 to 202,016 GFF3700 GFF3701 - FIG004694: Hypothetical protein, at 202,143 to 202,670 GFF3701 GFF3702 - Beta-propeller domains of methanol dehydrogenase type, at 202,676 to 203,533 GFF3702
Locus Name Description Strand Phenotype
GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) + insig.
GFF3693 Oxidoreductase + insig.
GFF3694 Phosphoesterase, PA-phosphatase related + insig.
GFF3695 hypothetical protein + insig.
GFF3696 mRNA 3-end processing factor + insig.
GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC + insig.
GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity + insig.
GFF3699 Thioredoxin 2 - no data
GFF3700 FIG006285: hypothetical protein + no data
GFF3701 FIG004694: Hypothetical protein - insig.
GFF3702 Beta-propeller domains of methanol dehydrogenase type - insig.

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