Gene info for GFF3618 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000007, - strand, nucleotides 130,787 to 131,695
See nucleotide sequence around GFF3618 or for all of scaffold scaffold00000007

Nearby Genes

500 ntGFF3613 and GFF3614 are separated by 8 nucleotidesGFF3614 and GFF3615 are separated by 3 nucleotidesGFF3615 and GFF3616 are separated by 71 nucleotidesGFF3616 and GFF3617 are separated by 52 nucleotidesGFF3617 and GFF3618 are separated by 44 nucleotidesGFF3618 and GFF3619 are separated by 117 nucleotidesGFF3619 and GFF3620 are separated by 219 nucleotidesGFF3620 and GFF3621 are separated by 87 nucleotidesGFF3621 and GFF3622 are separated by 19 nucleotidesGFF3622 and GFF3623 are separated by 367 nucleotides GFF3613 - Protein of unknown function DUF55, at 127,444 to 127,917 GFF3613 GFF3614 - UPF0056 inner membrane protein YchE, at 127,926 to 128,579 GFF3614 GFF3615 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 128,583 to 129,329 GFF3615 GFF3616 - 2-hydroxychromene-2-carboxylate isomerase family protein, at 129,401 to 130,006 GFF3616 GFF3617 - Dienelactone hydrolase family protein, at 130,059 to 130,742 GFF3617 GFF3618 - Transcriptional regulator, LysR family, at 130,787 to 131,695 GFF3618 GFF3619 - no description, at 131,813 to 132,139 GFF3619 GFF3620 - hypothetical protein, at 132,359 to 132,727 GFF3620 GFF3621 - Magnesium and cobalt transport protein CorA, at 132,815 to 133,981 GFF3621 GFF3622 - Porphobilinogen synthase (EC 4.2.1.24), at 134,001 to 134,987 GFF3622 GFF3623 - Protoporphyrinogen IX oxidase, novel form, HemJ (EC 1.3.-.-), at 135,355 to 135,783 GFF3623
Locus Name Description Strand Phenotype
GFF3613 Protein of unknown function DUF55 + insig.
GFF3614 UPF0056 inner membrane protein YchE - insig.
GFF3615 Oxidoreductase, short-chain dehydrogenase/reductase family - insig.
GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein + cofit
GFF3617 Dienelactone hydrolase family protein + insig.
GFF3618 Transcriptional regulator, LysR family - cofit
GFF3619 no description + cofit
GFF3620 hypothetical protein + insig.
GFF3621 Magnesium and cobalt transport protein CorA - strong
GFF3622 Porphobilinogen synthase (EC 4.2.1.24) - no data
GFF3623 Protoporphyrinogen IX oxidase, novel form, HemJ (EC 1.3.-.-) + no data

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