Gene info for GFF3613 in Variovorax sp. SCN45

Annotation: Protein of unknown function DUF55
Type 1: Protein-coding gene
Located on scaffold scaffold00000007, + strand, nucleotides 127,444 to 127,917
See nucleotide sequence around GFF3613 or for all of scaffold scaffold00000007

Nearby Genes

500 ntGFF3608 and GFF3609 overlap by 4 nucleotidesGFF3609 and GFF3610 are separated by 268 nucleotidesGFF3610 and GFF3611 are separated by 8 nucleotidesGFF3611 and GFF3612 are separated by 34 nucleotidesGFF3612 and GFF3613 are separated by 7 nucleotidesGFF3613 and GFF3614 are separated by 8 nucleotidesGFF3614 and GFF3615 are separated by 3 nucleotidesGFF3615 and GFF3616 are separated by 71 nucleotidesGFF3616 and GFF3617 are separated by 52 nucleotidesGFF3617 and GFF3618 are separated by 44 nucleotides GFF3608 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 121,434 to 122,510 GFF3608 GFF3609 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 122,507 to 123,328 GFF3609 GFF3610 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 123,597 to 124,370 GFF3610 GFF3611 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 124,379 to 126,235 GFF3611 GFF3612 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 126,270 to 127,436 GFF3612 GFF3613 - Protein of unknown function DUF55, at 127,444 to 127,917 GFF3613 GFF3614 - UPF0056 inner membrane protein YchE, at 127,926 to 128,579 GFF3614 GFF3615 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 128,583 to 129,329 GFF3615 GFF3616 - 2-hydroxychromene-2-carboxylate isomerase family protein, at 129,401 to 130,006 GFF3616 GFF3617 - Dienelactone hydrolase family protein, at 130,059 to 130,742 GFF3617 GFF3618 - Transcriptional regulator, LysR family, at 130,787 to 131,695 GFF3618
Locus Name Description Strand Phenotype
GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3610 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3611 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) + insig.
GFF3612 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3613 Protein of unknown function DUF55 + insig.
GFF3614 UPF0056 inner membrane protein YchE - insig.
GFF3615 Oxidoreductase, short-chain dehydrogenase/reductase family - insig.
GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein + cofit
GFF3617 Dienelactone hydrolase family protein + insig.
GFF3618 Transcriptional regulator, LysR family - cofit

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