Gene info for PS417_18395 in Pseudomonas simiae WCS417

Updated annotation (from data): D-ribose ABC transporter, permease component RbsC
Rationale: Specifically important for utilizing D-Ribose.
Original annotation: ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 4,004,139 to 4,005,116
See nucleotide sequence around PS417_18395 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032285, uniprot: A0A1N7UNQ5

Nearby Genes

500 ntPS417_18370 and PS417_18375 are separated by 33 nucleotidesPS417_18375 and PS417_18380 are separated by 25 nucleotidesPS417_18380 and PS417_18385 overlap by 4 nucleotidesPS417_18385 and PS417_18390 are separated by 23 nucleotidesPS417_18390 and PS417_18395 are separated by 3 nucleotidesPS417_18395 and PS417_18400 overlap by 4 nucleotidesPS417_18400 and PS417_18405 are separated by 57 nucleotidesPS417_18405 and PS417_18410 are separated by 553 nucleotidesPS417_18410 and PS417_18415 are separated by 171 nucleotidesPS417_18415 and PS417_18420 are separated by 4 nucleotides PS417_18370: PS417_18370 - hypothetical protein, at 4,000,471 to 4,000,683 _18370 PS417_18375: PS417_18375 - hypothetical protein, at 4,000,717 to 4,001,745 _18375 PS417_18380: PS417_18380 - ribose pyranase, at 4,001,771 to 4,002,175 _18380 PS417_18385: PS417_18385 - ribokinase, at 4,002,172 to 4,003,089 _18385 PS417_18390: PS417_18390 - LacI family transcriptional regulator, at 4,003,113 to 4,004,135 _18390 PS417_18395: PS417_18395 - D-ribose ABC transporter, permease component RbsC (from data), at 4,004,139 to 4,005,116 _18395 PS417_18400: PS417_18400 - D-ribose ABC transporter, ATPase component RbsA (from data), at 4,005,113 to 4,006,666 _18400 PS417_18405: PS417_18405 - D-ribose ABC transporter, substrate-binding component RbsB (from data), at 4,006,724 to 4,007,680 _18405 PS417_18410: PS417_18410 - glutaminase, at 4,008,234 to 4,009,322 _18410 PS417_18415: PS417_18415 - hypothetical protein, at 4,009,494 to 4,009,745 _18415 PS417_18420: PS417_18420 - deoxyribonuclease, at 4,009,750 to 4,010,439 _18420
Locus Name Description Strand Phenotype
PS417_18370 PS417_18370 hypothetical protein + sig.
PS417_18375 PS417_18375 hypothetical protein - sig.
PS417_18380 PS417_18380 ribose pyranase - no data
PS417_18385 PS417_18385 ribokinase - no data
PS417_18390 PS417_18390 LacI family transcriptional regulator - strong
PS417_18395 PS417_18395 D-ribose ABC transporter, permease component RbsC (from data) - sig.
PS417_18400 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) - strong
PS417_18405 PS417_18405 D-ribose ABC transporter, substrate-binding component RbsB (from data) - no data
PS417_18410 PS417_18410 glutaminase + sig.
PS417_18415 PS417_18415 hypothetical protein + no data
PS417_18420 PS417_18420 deoxyribonuclease + sig.

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