Gene info for GFF3554 in Pseudomonas sp. DMC3

Annotation: HTH-type transcriptional regulator PgrR
Type 1: Protein-coding gene
Located on scaffold scaffold00000008, - strand, nucleotides 138,509 to 139,423
See nucleotide sequence around GFF3554 or for all of scaffold scaffold00000008

Nearby Genes

500 ntGFF3549 and GFF3550 overlap by 1 nucleotidesGFF3550 and GFF3551 are separated by 74 nucleotidesGFF3551 and GFF3552 are separated by 313 nucleotidesGFF3552 and GFF3553 are separated by 23 nucleotidesGFF3553 and GFF3554 are separated by 21 nucleotidesGFF3554 and GFF3555 are separated by 87 nucleotidesGFF3555 and GFF3556 are separated by 130 nucleotidesGFF3556 and GFF3557 are separated by 24 nucleotidesGFF3557 and GFF3558 are separated by 33 nucleotidesGFF3558 and GFF3559 overlap by 8 nucleotides GFF3549 - Phosphate transport system permease protein PstA, at 133,366 to 134,277 GFF3549 GFF3550 - Phosphate transport system permease protein PstC, at 134,277 to 135,242 GFF3550 GFF3551 - Phosphate-binding protein PstS, at 135,317 to 136,348 GFF3551 GFF3552 - Circadian clock protein kinase KaiC, at 136,662 to 138,101 GFF3552 GFF3553 - Transcriptional regulatory protein WalR, at 138,125 to 138,487 GFF3553 GFF3554 - HTH-type transcriptional regulator PgrR, at 138,509 to 139,423 GFF3554 GFF3555 - hypothetical protein, at 139,511 to 140,047 GFF3555 GFF3556 - Glycerol dehydrogenase, at 140,178 to 141,302 GFF3556 GFF3557 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 141,327 to 142,097 GFF3557 GFF3558 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 142,131 to 142,835 GFF3558 GFF3559 - Vitamin B12 import ATP-binding protein BtuD, at 142,828 to 144,609 GFF3559
Locus Name Description Strand Phenotype
GFF3549 Phosphate transport system permease protein PstA - cofit
GFF3550 Phosphate transport system permease protein PstC - cofit
GFF3551 Phosphate-binding protein PstS - insig.
GFF3552 Circadian clock protein kinase KaiC + insig.
GFF3553 Transcriptional regulatory protein WalR + insig.
GFF3554 HTH-type transcriptional regulator PgrR - cofit
GFF3555 hypothetical protein - insig.
GFF3556 Glycerol dehydrogenase - insig.
GFF3557 3-oxoacyl-[acyl-carrier-protein] reductase FabG - cofit
GFF3558 High-affinity branched-chain amino acid transport ATP-binding protein LivF - insig.
GFF3559 Vitamin B12 import ATP-binding protein BtuD - insig.

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