Gene info for GFF3488 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, GntR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000006, + strand, nucleotides 311,165 to 311,899
See nucleotide sequence around GFF3488 or for all of scaffold scaffold00000006

Nearby Genes

500 ntGFF3483 and GFF3484 are separated by 67 nucleotidesGFF3484 and GFF3485 are separated by 95 nucleotidesGFF3485 and GFF3486 are separated by 19 nucleotidesGFF3486 and GFF3487 are separated by 10 nucleotidesGFF3487 and GFF3488 are separated by 262 nucleotidesGFF3488 and GFF3489 are separated by 86 nucleotidesGFF3489 and GFF3490 are separated by 12 nucleotidesGFF3490 and GFF3491 are separated by 107 nucleotidesGFF3491 and GFF3492 are separated by 126 nucleotidesGFF3492 and GFF3493 are separated by 13 nucleotides GFF3483 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 305,549 to 306,409 GFF3483 GFF3484 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 306,477 to 307,670 GFF3484 GFF3485 - Ferredoxin, 2Fe-2S, at 307,766 to 308,089 GFF3485 GFF3486 - glutamine synthetase family protein, at 308,109 to 309,557 GFF3486 GFF3487 - InterPro IPR005806 COGs COG2146, at 309,568 to 310,902 GFF3487 GFF3488 - Transcriptional regulator, GntR family, at 311,165 to 311,899 GFF3488 GFF3489 - Transcriptional regulator, AcrR family, at 311,986 to 312,603 GFF3489 GFF3490 - Putative amidase R03093, at 312,616 to 314,112 GFF3490 GFF3491 - Ser/Thr protein phosphatase family protein, at 314,220 to 315,026 GFF3491 GFF3492 - hypothetical protein, at 315,153 to 315,326 GFF3492 GFF3493 - Transcriptional regulator, LysR family, at 315,340 to 316,320 GFF3493
Locus Name Description Strand Phenotype
GFF3483 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF3484 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF3485 Ferredoxin, 2Fe-2S - insig.
GFF3486 glutamine synthetase family protein - insig.
GFF3487 InterPro IPR005806 COGs COG2146 - insig.
GFF3488 Transcriptional regulator, GntR family + insig.
GFF3489 Transcriptional regulator, AcrR family + insig.
GFF3490 Putative amidase R03093 - insig.
GFF3491 Ser/Thr protein phosphatase family protein - insig.
GFF3492 hypothetical protein + no data
GFF3493 Transcriptional regulator, LysR family - insig.

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