Gene info for GFF3480 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Type IV secretory pathway, protease TraF
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, - strand, nucleotides 362,576 to 363,139
See nucleotide sequence around GFF3480 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF3475 and GFF3476 overlap by 4 nucleotidesGFF3476 and GFF3477 are separated by 17 nucleotidesGFF3477 and GFF3478 are separated by 2 nucleotidesGFF3478 and GFF3479 are separated by 305 nucleotidesGFF3479 and GFF3480 are separated by 271 nucleotidesGFF3480 and GFF3481 overlap by 4 nucleotidesGFF3481 and GFF3482 overlap by 4 nucleotidesGFF3482 and GFF3483 overlap by 13 nucleotidesGFF3483 and GFF3484 are separated by 291 nucleotidesGFF3484 and GFF3485 are separated by 430 nucleotides GFF3475 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 356,663 to 357,430 GFF3475 GFF3476 - Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1), at 357,427 to 358,143 GFF3476 GFF3477 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 358,161 to 359,033 GFF3477 GFF3478 - Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1), at 359,036 to 360,040 GFF3478 GFF3479 - Type IV secretory pathway, VirD2 components (relaxase), at 360,346 to 362,304 GFF3479 GFF3480 - Type IV secretory pathway, protease TraF, at 362,576 to 363,139 GFF3480 GFF3481 - Glycosidases, at 363,136 to 363,717 GFF3481 GFF3482 - FIG00457034: hypothetical protein, at 363,714 to 363,995 GFF3482 GFF3483 - Chromosome (plasmid) partitioning protein ParA, at 363,983 to 364,621 GFF3483 GFF3484 - Mobile element protein, at 364,913 to 365,908 GFF3484 GFF3485 - Plasmid replication initiator protein, at 366,339 to 367,178 GFF3485
Locus Name Description Strand Phenotype
GFF3475 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) + insig.
GFF3476 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) + insig.
GFF3477 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) + insig.
GFF3478 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) + insig.
GFF3479 Type IV secretory pathway, VirD2 components (relaxase) - insig.
GFF3480 Type IV secretory pathway, protease TraF - no data
GFF3481 Glycosidases - insig.
GFF3482 FIG00457034: hypothetical protein - no data
GFF3483 Chromosome (plasmid) partitioning protein ParA - no data
GFF3484 Mobile element protein + insig.
GFF3485 Plasmid replication initiator protein - cofit

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