Gene info for PS417_17720 in Pseudomonas simiae WCS417

Updated annotation (from data): xylitol 2-dehydrogenase (EC 1.1.1.9)
Rationale: Specifically important for: Xylitol. This is the first step in xylitol degradation (SEED_correct)
Original annotation: iditol 2-dehydrogenase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 3,867,597 to 3,868,676
See nucleotide sequence around PS417_17720 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032152, uniprot: U1SJJ5

Nearby Genes

500 ntPS417_17690 and PS417_17700 are separated by 779 nucleotidesPS417_17700 and PS417_17705 are separated by 58 nucleotidesPS417_17705 and PS417_17710 overlap by 4 nucleotidesPS417_17710 and PS417_17715 are separated by 140 nucleotidesPS417_17715 and PS417_17720 are separated by 3 nucleotidesPS417_17720 and PS417_17725 are separated by 28 nucleotidesPS417_17725 and PS417_17730 overlap by 35 nucleotidesPS417_17730 and PS417_17735 are separated by 63 nucleotidesPS417_17735 and PS417_17740 are separated by 294 nucleotidesPS417_17740 and PS417_17745 overlap by 4 nucleotides PS417_17690: PS417_17690 - amidase, at 3,861,089 to 3,862,492 _17690 PS417_17700: PS417_17700 - LysR family transcriptional regulator, at 3,863,272 to 3,864,135 _17700 PS417_17705: PS417_17705 - LacI family transcriptional regulator, at 3,864,194 to 3,865,198 _17705 PS417_17710: PS417_17710 - short-chain dehydrogenase, at 3,865,195 to 3,865,920 _17710 PS417_17715: PS417_17715 - actin, at 3,866,061 to 3,867,593 _17715 PS417_17720: PS417_17720 - xylitol 2-dehydrogenase (EC 1.1.1.9) (from data), at 3,867,597 to 3,868,676 _17720 PS417_17725: PS417_17725 - ribose ABC transporter permease, at 3,868,705 to 3,869,697 _17725 PS417_17730: PS417_17730 - ribonucleotide-diphosphate reductase subunit alpha, at 3,869,663 to 3,871,171 _17730 PS417_17735: PS417_17735 - LacI family transcriptional regulator, at 3,871,235 to 3,872,158 _17735 PS417_17740: PS417_17740 - fatty acid hydroxylase, at 3,872,453 to 3,873,130 _17740 PS417_17745: PS417_17745 - gluconolactonase, at 3,873,127 to 3,874,227 _17745
Locus Name Description Strand Phenotype
PS417_17690 PS417_17690 amidase + insig.
PS417_17700 PS417_17700 LysR family transcriptional regulator + insig.
PS417_17705 PS417_17705 LacI family transcriptional regulator + sig.
PS417_17710 PS417_17710 short-chain dehydrogenase - no data
PS417_17715 PS417_17715 actin - insig.
PS417_17720 PS417_17720 xylitol 2-dehydrogenase (EC 1.1.1.9) (from data) - strong
PS417_17725 PS417_17725 ribose ABC transporter permease - sig.
PS417_17730 PS417_17730 ribonucleotide-diphosphate reductase subunit alpha - no data
PS417_17735 PS417_17735 LacI family transcriptional regulator - strong
PS417_17740 PS417_17740 fatty acid hydroxylase + insig.
PS417_17745 PS417_17745 gluconolactonase + insig.

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