Gene info for GFF3455 in Variovorax sp. SCN45

Annotation: Two component response regulator associated with urea and amide use
Type 1: Protein-coding gene
Located on scaffold scaffold00000006, - strand, nucleotides 276,888 to 277,538
See nucleotide sequence around GFF3455 or for all of scaffold scaffold00000006

Nearby Genes

500 ntGFF3450 and GFF3451 are separated by 16 nucleotidesGFF3451 and GFF3452 are separated by 16 nucleotidesGFF3452 and GFF3453 are separated by 64 nucleotidesGFF3453 and GFF3454 are separated by 124 nucleotidesGFF3454 and GFF3455 are separated by 15 nucleotidesGFF3455 and GFF3456 are separated by 2 nucleotidesGFF3456 and GFF3457 are separated by 49 nucleotidesGFF3457 and GFF3458 overlap by 4 nucleotidesGFF3458 and GFF3459 overlap by 4 nucleotidesGFF3459 and GFF3460 are separated by 39 nucleotides GFF3450 - Transcriptional regulator, LacI family, at 272,510 to 273,544 GFF3450 GFF3451 - no description, at 273,561 to 273,908 GFF3451 GFF3452 - hypothetical protein, at 273,925 to 275,598 GFF3452 GFF3453 - hypothetical protein, at 275,663 to 275,857 GFF3453 GFF3454 - Cys regulon transcriptional activator CysB, at 275,982 to 276,872 GFF3454 GFF3455 - Two component response regulator associated with urea and amide use, at 276,888 to 277,538 GFF3455 GFF3456 - Possible regulatory protein similar to urea ABC transporter, substrate binding protein, at 277,541 to 278,695 GFF3456 GFF3457 - Nitric oxide reductase activation protein NorD, at 278,745 to 280,397 GFF3457 GFF3458 - Rubisco activation protein CbbQ, at 280,394 to 281,212 GFF3458 GFF3459 - Aliphatic amidase AmiE (EC 3.5.1.4), at 281,209 to 282,246 GFF3459 GFF3460 - Urea ABC transporter, ATPase protein UrtE, at 282,286 to 282,975 GFF3460
Locus Name Description Strand Phenotype
GFF3450 Transcriptional regulator, LacI family + cofit
GFF3451 no description - insig.
GFF3452 hypothetical protein - insig.
GFF3453 hypothetical protein - no data
GFF3454 Cys regulon transcriptional activator CysB + insig.
GFF3455 Two component response regulator associated with urea and amide use - insig.
GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein - strong
GFF3457 Nitric oxide reductase activation protein NorD - insig.
GFF3458 Rubisco activation protein CbbQ - insig.
GFF3459 Aliphatic amidase AmiE (EC 3.5.1.4) - insig.
GFF3460 Urea ABC transporter, ATPase protein UrtE - insig.

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