Gene info for PS417_17560 in Pseudomonas simiae WCS417

Updated annotation (from data): Dihydrolipoyl dehydrogenase (EC 1.8.1.4)
Rationale: Specifically important for utilizing L-Leucine; L-Isoleucine. Automated validation from mutant phenotype: the predicted function (1.8.1.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: dihydrolipoamide dehydrogenase
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 3,834,802 to 3,836,181
See nucleotide sequence around PS417_17560 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032123, uniprot: A0A1N7UN52

Nearby Genes

500 ntPS417_17535 and PS417_17540 overlap by 4 nucleotidesPS417_17540 and PS417_17545 are separated by 195 nucleotidesPS417_17545 and PS417_17550 are separated by 1 nucleotidesPS417_17550 and PS417_17555 are separated by 0 nucleotidesPS417_17555 and PS417_17560 are separated by 3 nucleotidesPS417_17560 and PS417_17565 are separated by 124 nucleotidesPS417_17565 and PS417_17580 are separated by 1162 nucleotidesPS417_17580 and PS417_17585 are separated by 16 nucleotidesPS417_17585 and PS417_17590 are separated by 244 nucleotidesPS417_17590 and PS417_17595 are separated by 72 nucleotides PS417_17535: PS417_17535 - beta-lactamase, at 3,829,702 to 3,830,565 _17535 PS417_17540: PS417_17540 - ArsR family transcriptional regulator, at 3,830,562 to 3,831,047 _17540 PS417_17545: PS417_17545 - 2-oxoisovalerate dehydrogenase, at 3,831,243 to 3,832,478 _17545 PS417_17550: PS417_17550 - branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data), at 3,832,480 to 3,833,538 _17550 PS417_17555: PS417_17555 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 3,833,539 to 3,834,798 _17555 PS417_17560: PS417_17560 - Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data), at 3,834,802 to 3,836,181 _17560 PS417_17565: PS417_17565 - branched-chain amino acid aminotransferase, at 3,836,306 to 3,837,325 _17565 PS417_17580: PS417_17580 - citrulline utilization hydrolase (from data), at 3,838,488 to 3,839,414 _17580 PS417_17585: PS417_17585 - ornithine cyclodeaminase, at 3,839,431 to 3,840,477 _17585 PS417_17590: PS417_17590 - ABC transporter substrate-binding protein, at 3,840,722 to 3,841,498 _17590 PS417_17595: PS417_17595 - amino acid ABC transporter permease, at 3,841,571 to 3,842,272 _17595
Locus Name Description Strand Phenotype
PS417_17535 PS417_17535 beta-lactamase + insig.
PS417_17540 PS417_17540 ArsR family transcriptional regulator - no data
PS417_17545 PS417_17545 2-oxoisovalerate dehydrogenase + sig.
PS417_17550 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) + strong
PS417_17555 PS417_17555 branched-chain alpha-keto acid dehydrogenase subunit E2 + no data
PS417_17560 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) + strong
PS417_17565 PS417_17565 branched-chain amino acid aminotransferase + strong
PS417_17580 PS417_17580 citrulline utilization hydrolase (from data) + strong
PS417_17585 PS417_17585 ornithine cyclodeaminase + strong
PS417_17590 PS417_17590 ABC transporter substrate-binding protein + sig.
PS417_17595 PS417_17595 amino acid ABC transporter permease + strong

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