Gene info for GFF3421 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
Type 1: Protein-coding gene
Located on scaffold NODE_2_length_393766_cov_80.1428, - strand, nucleotides 185,600 to 186,337
See nucleotide sequence around GFF3421 or for all of scaffold NODE_2_length_393766_cov_80.1428

Nearby Genes

500 ntGFF3416 and GFF3417 are separated by 3 nucleotidesGFF3417 and GFF3418 are separated by 86 nucleotidesGFF3418 and GFF3419 are separated by 53 nucleotidesGFF3419 and GFF3420 are separated by 11 nucleotidesGFF3420 and GFF3421 overlap by 4 nucleotidesGFF3421 and GFF3422 are separated by 99 nucleotidesGFF3422 and GFF3423 are separated by 447 nucleotidesGFF3423 and GFF3424 are separated by 456 nucleotidesGFF3424 and GFF3425 are separated by 321 nucleotidesGFF3425 and GFF3426 are separated by 488 nucleotides GFF3416 - Adenylosuccinate lyase (EC 4.3.2.2), at 181,539 to 182,909 GFF3416 GFF3417 - FIG002903: a protein of unknown function perhaps involved in purine metabolism, at 182,913 to 183,554 GFF3417 GFF3418 - tRNA-specific 2-thiouridylase MnmA, at 183,641 to 184,747 GFF3418 GFF3419 - Nudix-like NDP and NTP phosphohydrolase YmfB, at 184,801 to 185,262 GFF3419 GFF3420 - FIG01056067: hypothetical protein, at 185,274 to 185,603 GFF3420 GFF3421 - Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70), at 185,600 to 186,337 GFF3421 GFF3422 - Isocitrate dehydrogenase [NADP] (EC 1.1.1.42), at 186,437 to 187,687 GFF3422 GFF3423 - FIG00643583: hypothetical protein, at 188,135 to 189,259 GFF3423 GFF3424 - FIG01045472: hypothetical protein, at 189,716 to 189,919 GFF3424 GFF3425 - Probable lipoprotein envF precursor, at 190,241 to 191,029 GFF3425 GFF3426 - Virulence protein MsgA, at 191,518 to 191,757 GFF3426
Locus Name Description Strand Phenotype
GFF3416 Adenylosuccinate lyase (EC 4.3.2.2) - no data
GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism - strong
GFF3418 tRNA-specific 2-thiouridylase MnmA - no data
GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB - insig.
GFF3420 FIG01056067: hypothetical protein - no data
GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) - insig.
GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) + no data
GFF3423 FIG00643583: hypothetical protein + insig.
GFF3424 FIG01045472: hypothetical protein - no data
GFF3425 Probable lipoprotein envF precursor - no data
GFF3426 Virulence protein MsgA - insig.

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