Gene info for PS417_17420 in Pseudomonas simiae WCS417

Updated annotation (from data): ethanol oxidation regulatory protein ercA
Rationale: Strongest phenotype is on ethanol. Similar to ercA (PA1991) which apparently has a regulatory role (PMCID: PMC3754586) rather than being directly involved in catabolism. Consistent with a regulatory role, this gene has pleiotropic phenotypes. The main ethanol dehydrogenase is probably PS417_17460.
Original annotation: alcohol dehydrogenase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 3,805,701 to 3,806,864
See nucleotide sequence around PS417_17420 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032095, uniprot: A0A1N7UDZ8

Nearby Genes

500 ntPS417_17395 and PS417_17400 are separated by 116 nucleotidesPS417_17400 and PS417_17405 are separated by 177 nucleotidesPS417_17405 and PS417_17410 are separated by 184 nucleotidesPS417_17410 and PS417_17415 are separated by 79 nucleotidesPS417_17415 and PS417_17420 overlap by 17 nucleotidesPS417_17420 and PS417_17425 overlap by 11 nucleotidesPS417_17425 and PS417_17430 are separated by 107 nucleotidesPS417_17430 and PS417_17435 are separated by 121 nucleotidesPS417_17435 and PS417_17440 are separated by 126 nucleotidesPS417_17440 and PS417_17445 are separated by 16 nucleotides PS417_17395: PS417_17395 - MFS transporter, at 3,799,291 to 3,800,934 _17395 PS417_17400: PS417_17400 - TetR family transcriptional regulator, at 3,801,051 to 3,801,638 _17400 PS417_17405: PS417_17405 - AraC family transcriptional regulator, at 3,801,816 to 3,802,604 _17405 PS417_17410: PS417_17410 - membrane protein, at 3,802,789 to 3,804,267 _17410 PS417_17415: PS417_17415 - histidine kinase, at 3,804,347 to 3,805,717 _17415 PS417_17420: PS417_17420 - ethanol oxidation regulatory protein ercA (from data), at 3,805,701 to 3,806,864 _17420 PS417_17425: PS417_17425 - hypothetical protein, at 3,806,854 to 3,807,150 _17425 PS417_17430: PS417_17430 - aldehyde dehydrogenase, at 3,807,258 to 3,808,778 _17430 PS417_17435: PS417_17435 - dehydrogenase, at 3,808,900 to 3,810,675 _17435 PS417_17440: PS417_17440 - beta-lactamase, at 3,810,802 to 3,811,734 _17440 PS417_17445: PS417_17445 - sulfur oxidation protein SoxZ, at 3,811,751 to 3,812,500 _17445
Locus Name Description Strand Phenotype
PS417_17395 PS417_17395 MFS transporter - strong
PS417_17400 PS417_17400 TetR family transcriptional regulator - insig.
PS417_17405 PS417_17405 AraC family transcriptional regulator + insig.
PS417_17410 PS417_17410 membrane protein - insig.
PS417_17415 PS417_17415 histidine kinase - strong
PS417_17420 PS417_17420 ethanol oxidation regulatory protein ercA (from data) - strong
PS417_17425 PS417_17425 hypothetical protein + strong
PS417_17430 PS417_17430 aldehyde dehydrogenase - insig.
PS417_17435 PS417_17435 dehydrogenase - strong
PS417_17440 PS417_17440 beta-lactamase - insig.
PS417_17445 PS417_17445 sulfur oxidation protein SoxZ - insig.

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