Gene info for GFF3396 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: L,D-transpeptidase YcfS
Type 1: Protein-coding gene
Located on scaffold NODE_2_length_393766_cov_80.1428, - strand, nucleotides 159,834 to 160,799
See nucleotide sequence around GFF3396 or for all of scaffold NODE_2_length_393766_cov_80.1428

Nearby Genes

500 ntGFF3391 and GFF3392 are separated by 227 nucleotidesGFF3392 and GFF3393 are separated by 178 nucleotidesGFF3393 and GFF3394 are separated by 74 nucleotidesGFF3394 and GFF3395 are separated by 241 nucleotidesGFF3395 and GFF3396 are separated by 96 nucleotidesGFF3396 and GFF3397 are separated by 147 nucleotidesGFF3397 and GFF3398 are separated by 5 nucleotidesGFF3398 and GFF3399 are separated by 173 nucleotidesGFF3399 and GFF3400 overlap by 8 nucleotidesGFF3400 and GFF3401 overlap by 1 nucleotides GFF3391 - YcfP protein: probably an esterase that is part of a salvage cluster, at 155,709 to 156,251 GFF3391 GFF3392 - NADH dehydrogenase (EC 1.6.99.3), at 156,479 to 157,810 GFF3392 GFF3393 - FIG01200701: possible membrane protein, at 157,989 to 158,528 GFF3393 GFF3394 - putative transcriptional repressor, at 158,603 to 159,238 GFF3394 GFF3395 - Putative outer membrane protein, at 159,480 to 159,737 GFF3395 GFF3396 - L,D-transpeptidase YcfS, at 159,834 to 160,799 GFF3396 GFF3397 - Transcription-repair coupling factor, at 160,947 to 164,393 GFF3397 GFF3398 - FIG01046376: hypothetical protein, at 164,399 to 164,557 GFF3398 GFF3399 - Lipoprotein releasing system transmembrane protein LolC, at 164,731 to 165,930 GFF3399 GFF3400 - Lipoprotein releasing system ATP-binding protein LolD, at 165,923 to 166,624 GFF3400 GFF3401 - Lipoprotein releasing system transmembrane protein LolE, at 166,624 to 167,868 GFF3401
Locus Name Description Strand Phenotype
GFF3391 YcfP protein: probably an esterase that is part of a salvage cluster + insig.
GFF3392 NADH dehydrogenase (EC 1.6.99.3) + insig.
GFF3393 FIG01200701: possible membrane protein + cofit
GFF3394 putative transcriptional repressor - cofit
GFF3395 Putative outer membrane protein + insig.
GFF3396 L,D-transpeptidase YcfS - insig.
GFF3397 Transcription-repair coupling factor - strong
GFF3398 FIG01046376: hypothetical protein + no data
GFF3399 Lipoprotein releasing system transmembrane protein LolC + no data
GFF3400 Lipoprotein releasing system ATP-binding protein LolD + no data
GFF3401 Lipoprotein releasing system transmembrane protein LolE + no data

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