Gene info for PS417_17365 in Pseudomonas simiae WCS417

Updated annotation (from data): galactaro-1,5-lactonase
Rationale: Specifically important in carbon source D-Galacturonic Acid monohydrate. This is the second step after D-galacturonate dehydrogenase (PS417_17360) and forms meso-galactarate, which is the substrate of PS417_04210. The substrate is probably the 1,5-lactone, not the 1,4-lactone, given the characterization of the D-galacturonate dehydrogenase from Agrobacterium tumefaciens (PMID:24450804), which is 51% identical to PS417_17360.
Original annotation: gluconolactonase
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 3,793,415 to 3,794,290
See nucleotide sequence around PS417_17365 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586032084, uniprot: A0A1N7TYW3

Nearby Genes

500 ntPS417_17340 and PS417_17345 overlap by 7 nucleotidesPS417_17345 and PS417_17350 are separated by 3 nucleotidesPS417_17350 and PS417_17355 are separated by 257 nucleotidesPS417_17355 and PS417_17360 are separated by 232 nucleotidesPS417_17360 and PS417_17365 are separated by 3 nucleotidesPS417_17365 and PS417_17370 are separated by 51 nucleotidesPS417_17370 and PS417_17375 are separated by 64 nucleotidesPS417_17375 and PS417_17380 are separated by 1 nucleotidesPS417_17380 and PS417_17385 are separated by 2 nucleotidesPS417_17385 and PS417_17390 are separated by 110 nucleotides PS417_17340: PS417_17340 - GNAT family acetyltransferase, at 3,789,147 to 3,789,614 _17340 PS417_17345: PS417_17345 - hypothetical protein, at 3,789,608 to 3,789,973 _17345 PS417_17350: PS417_17350 - copper resistance protein CopD, at 3,789,977 to 3,790,834 _17350 PS417_17355: PS417_17355 - porin, at 3,791,092 to 3,792,354 _17355 PS417_17360: PS417_17360 - D-galacturonate dehydrogenase (EC 1.1.1.203) (from data), at 3,792,587 to 3,793,411 _17360 PS417_17365: PS417_17365 - galactaro-1,5-lactonase (from data), at 3,793,415 to 3,794,290 _17365 PS417_17370: PS417_17370 - C4-dicarboxylate ABC transporter, at 3,794,342 to 3,795,304 _17370 PS417_17375: PS417_17375 - C4-dicarboxylate ABC transporter, at 3,795,369 to 3,795,896 _17375 PS417_17380: PS417_17380 - membrane protein, at 3,795,898 to 3,797,178 _17380 PS417_17385: PS417_17385 - aldose epimerase, at 3,797,181 to 3,798,038 _17385 PS417_17390: PS417_17390 - DSBA oxidoreductase, at 3,798,149 to 3,799,294 _17390
Locus Name Description Strand Phenotype
PS417_17340 PS417_17340 GNAT family acetyltransferase + insig.
PS417_17345 PS417_17345 hypothetical protein + insig.
PS417_17350 PS417_17350 copper resistance protein CopD + insig.
PS417_17355 PS417_17355 porin + insig.
PS417_17360 PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) + strong
PS417_17365 PS417_17365 galactaro-1,5-lactonase (from data) + sig.
PS417_17370 PS417_17370 C4-dicarboxylate ABC transporter + insig.
PS417_17375 PS417_17375 C4-dicarboxylate ABC transporter + insig.
PS417_17380 PS417_17380 membrane protein + insig.
PS417_17385 PS417_17385 aldose epimerase + insig.
PS417_17390 PS417_17390 DSBA oxidoreductase - strong

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