Gene info for GFF3353 in Variovorax sp. SCN45

Annotation: Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000006, + strand, nucleotides 175,773 to 176,618
See nucleotide sequence around GFF3353 or for all of scaffold scaffold00000006

Nearby Genes

500 ntGFF3348 and GFF3349 are separated by 160 nucleotidesGFF3349 and GFF3350 are separated by 3 nucleotidesGFF3350 and GFF3351 are separated by 14 nucleotidesGFF3351 and GFF3352 overlap by 17 nucleotidesGFF3352 and GFF3353 overlap by 4 nucleotidesGFF3353 and GFF3354 are separated by 31 nucleotidesGFF3354 and GFF3355 are separated by 19 nucleotidesGFF3355 and GFF3356 are separated by 204 nucleotidesGFF3356 and GFF3357 are separated by 78 nucleotidesGFF3357 and GFF3358 are separated by 127 nucleotides GFF3348 - Putative lipase, at 170,562 to 171,203 GFF3348 GFF3349 - Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1), at 171,364 to 172,545 GFF3349 GFF3350 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 172,549 to 174,378 GFF3350 GFF3351 - FIG00458971: hypothetical protein, at 174,393 to 174,950 GFF3351 GFF3352 - Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1), at 174,934 to 175,776 GFF3352 GFF3353 - Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1), at 175,773 to 176,618 GFF3353 GFF3354 - FIG00537998: hypothetical protein, at 176,650 to 177,546 GFF3354 GFF3355 - no description, at 177,566 to 177,958 GFF3355 GFF3356 - Probable transmembrane protein, at 178,163 to 178,588 GFF3356 GFF3357 - hypothetical protein, at 178,667 to 178,921 GFF3357 GFF3358 - Alkanesulfonate utilization operon LysR-family regulator Cbl, at 179,049 to 179,993 GFF3358
Locus Name Description Strand Phenotype
GFF3348 Putative lipase - insig.
GFF3349 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) + insig.
GFF3350 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3351 FIG00458971: hypothetical protein + insig.
GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) + insig.
GFF3353 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) + insig.
GFF3354 FIG00537998: hypothetical protein + insig.
GFF3355 no description - no data
GFF3356 Probable transmembrane protein + insig.
GFF3357 hypothetical protein - insig.
GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl - insig.

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