Gene info for GFF3348 in Variovorax sp. SCN45

Annotation: Putative lipase
Type 1: Protein-coding gene
Located on scaffold scaffold00000006, - strand, nucleotides 170,562 to 171,203
See nucleotide sequence around GFF3348 or for all of scaffold scaffold00000006

Nearby Genes

500 ntGFF3343 and GFF3344 are separated by 58 nucleotidesGFF3344 and GFF3345 are separated by 26 nucleotidesGFF3345 and GFF3346 overlap by 4 nucleotidesGFF3346 and GFF3347 are separated by 121 nucleotidesGFF3347 and GFF3348 are separated by 4 nucleotidesGFF3348 and GFF3349 are separated by 160 nucleotidesGFF3349 and GFF3350 are separated by 3 nucleotidesGFF3350 and GFF3351 are separated by 14 nucleotidesGFF3351 and GFF3352 overlap by 17 nucleotidesGFF3352 and GFF3353 overlap by 4 nucleotides GFF3343 - D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4), at 166,928 to 168,352 GFF3343 GFF3344 - Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains, at 168,411 to 168,929 GFF3344 GFF3345 - ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), glycolate utilization, at 168,956 to 169,555 GFF3345 GFF3346 - hypothetical protein, at 169,552 to 169,914 GFF3346 GFF3347 - Adenylate cyclase (EC 4.6.1.1), at 170,036 to 170,557 GFF3347 GFF3348 - Putative lipase, at 170,562 to 171,203 GFF3348 GFF3349 - Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1), at 171,364 to 172,545 GFF3349 GFF3350 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 172,549 to 174,378 GFF3350 GFF3351 - FIG00458971: hypothetical protein, at 174,393 to 174,950 GFF3351 GFF3352 - Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1), at 174,934 to 175,776 GFF3352 GFF3353 - Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1), at 175,773 to 176,618 GFF3353
Locus Name Description Strand Phenotype
GFF3343 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) - insig.
GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + insig.
GFF3345 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), glycolate utilization + insig.
GFF3346 hypothetical protein + no data
GFF3347 Adenylate cyclase (EC 4.6.1.1) + insig.
GFF3348 Putative lipase - insig.
GFF3349 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) + insig.
GFF3350 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF3351 FIG00458971: hypothetical protein + insig.
GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) + insig.
GFF3353 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) + insig.

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