Gene info for GFF3339 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: RNA polymerase sigma factor RpoE
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, + strand, nucleotides 223,652 to 224,245
See nucleotide sequence around GFF3339 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF3334 and GFF3335 are separated by 15 nucleotidesGFF3335 and GFF3336 are separated by 119 nucleotidesGFF3336 and GFF3337 are separated by 7 nucleotidesGFF3337 and GFF3338 are separated by 366 nucleotidesGFF3338 and GFF3339 are separated by 82 nucleotidesGFF3339 and GFF3340 are separated by 69 nucleotidesGFF3340 and GFF3341 are separated by 18 nucleotidesGFF3341 and GFF3342 are separated by 102 nucleotidesGFF3342 and GFF3343 are separated by 509 nucleotidesGFF3343 and GFF3344 overlap by 1 nucleotides GFF3334 - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39), at 219,730 to 220,680 GFF3334 GFF3335 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 220,696 to 221,457 GFF3335 GFF3336 - Acyl carrier protein, at 221,577 to 221,816 GFF3336 GFF3337 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 221,824 to 223,068 GFF3337 GFF3338 - hypothetical protein, at 223,435 to 223,569 GFF3338 GFF3339 - RNA polymerase sigma factor RpoE, at 223,652 to 224,245 GFF3339 GFF3340 - Sigma factor RpoE negative regulatory protein RseA, at 224,315 to 225,019 GFF3340 GFF3341 - Sigma factor RpoE negative regulatory protein RseB precursor, at 225,038 to 226,087 GFF3341 GFF3342 - HtrA protease/chaperone protein, at 226,190 to 227,686 GFF3342 GFF3343 - Translation elongation factor LepA, at 228,196 to 230,004 GFF3343 GFF3344 - Signal peptidase I (EC 3.4.21.89), at 230,004 to 230,981 GFF3344
Locus Name Description Strand Phenotype
GFF3334 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) + no data
GFF3335 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) + no data
GFF3336 Acyl carrier protein + no data
GFF3337 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) + no data
GFF3338 hypothetical protein + no data
GFF3339 RNA polymerase sigma factor RpoE + cofit
GFF3340 Sigma factor RpoE negative regulatory protein RseA + strong
GFF3341 Sigma factor RpoE negative regulatory protein RseB precursor + strong
GFF3342 HtrA protease/chaperone protein + no data
GFF3343 Translation elongation factor LepA + cofit
GFF3344 Signal peptidase I (EC 3.4.21.89) + no data

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