Gene info for GFF3253 in Variovorax sp. SCN45

Annotation: LPS-assembly protein LptD @ Organic solvent tolerance protein precursor
Type 1: Protein-coding gene
Located on scaffold scaffold00000006, - strand, nucleotides 69,528 to 72,122
See nucleotide sequence around GFF3253 or for all of scaffold scaffold00000006

Nearby Genes

500 ntGFF3248 and GFF3249 are separated by 181 nucleotidesGFF3249 and GFF3250 overlap by 4 nucleotidesGFF3250 and GFF3251 are separated by 296 nucleotidesGFF3251 and GFF3252 are separated by 4 nucleotidesGFF3252 and GFF3253 are separated by 20 nucleotidesGFF3253 and GFF3254 are separated by 236 nucleotidesGFF3254 and GFF3255 are separated by 69 nucleotidesGFF3255 and GFF3256 are separated by 83 nucleotidesGFF3256 and GFF3257 are separated by 101 nucleotidesGFF3257 and GFF3258 are separated by 101 nucleotides GFF3248 - NADP-dependent malic enzyme (EC 1.1.1.40), at 63,622 to 65,970 GFF3248 GFF3249 - Guanyl-specific ribonuclease (EC 3.1.27.3), at 66,152 to 66,565 GFF3249 GFF3250 - Barstar, ribonuclease (Barnase) inhibitor, at 66,562 to 67,041 GFF3250 GFF3251 - SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182), at 67,338 to 68,105 GFF3251 GFF3252 - Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8), at 68,110 to 69,507 GFF3252 GFF3253 - LPS-assembly protein LptD @ Organic solvent tolerance protein precursor, at 69,528 to 72,122 GFF3253 GFF3254 - Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 72,359 to 73,456 GFF3254 GFF3255 - 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193), at 73,526 to 74,263 GFF3255 GFF3256 - Peptidase, M20/M25/M40 family, at 74,347 to 75,702 GFF3256 GFF3257 - hypothetical protein, at 75,804 to 76,262 GFF3257 GFF3258 - hypothetical protein, at 76,364 to 79,288 GFF3258
Locus Name Description Strand Phenotype
GFF3248 NADP-dependent malic enzyme (EC 1.1.1.40) + insig.
GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) + insig.
GFF3250 Barstar, ribonuclease (Barnase) inhibitor + cofit
GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) - cofit
GFF3252 Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) - no data
GFF3253 LPS-assembly protein LptD @ Organic solvent tolerance protein precursor - no data
GFF3254 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA + cofit
GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) + insig.
GFF3256 Peptidase, M20/M25/M40 family + insig.
GFF3257 hypothetical protein + no data
GFF3258 hypothetical protein + insig.

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