Gene info for GFF320 in Variovorax sp. SCN45

Annotation: RNA polymerase ECF-type sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, - strand, nucleotides 353,137 to 353,727
See nucleotide sequence around GFF320 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF315 and GFF316 are separated by 16 nucleotidesGFF316 and GFF317 are separated by 5 nucleotidesGFF317 and GFF318 are separated by 98 nucleotidesGFF318 and GFF319 are separated by 17 nucleotidesGFF319 and GFF320 overlap by 4 nucleotidesGFF320 and GFF321 overlap by 19 nucleotidesGFF321 and GFF322 are separated by 33 nucleotidesGFF322 and GFF323 overlap by 4 nucleotidesGFF323 and GFF324 are separated by 38 nucleotidesGFF324 and GFF325 are separated by 154 nucleotides GFF315 - FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase, at 348,175 to 349,887 GFF315 GFF316 - Transmembrane protein, at 349,904 to 350,548 GFF316 GFF317 - Acyl carrier protein, at 350,554 to 350,865 GFF317 GFF318 - Uncharacterized protein YjgR, at 350,964 to 352,481 GFF318 GFF319 - EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR, at 352,499 to 353,140 GFF319 GFF320 - RNA polymerase ECF-type sigma factor, at 353,137 to 353,727 GFF320 GFF321 - hypothetical protein, at 353,709 to 353,975 GFF321 GFF322 - GTP cyclohydrolase II homolog, at 354,009 to 355,151 GFF322 GFF323 - Possible pyrimidine-degrading protein DUF1688, at 355,148 to 356,554 GFF323 GFF324 - Uracil phosphoribosyltransferase (EC 2.4.2.9), at 356,593 to 357,222 GFF324 GFF325 - Nucleoside ABC transporter, substrate-binding protein, at 357,377 to 358,381 GFF325
Locus Name Description Strand Phenotype
GFF315 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase - insig.
GFF316 Transmembrane protein - insig.
GFF317 Acyl carrier protein - insig.
GFF318 Uncharacterized protein YjgR + insig.
GFF319 EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR - insig.
GFF320 RNA polymerase ECF-type sigma factor - insig.
GFF321 hypothetical protein - insig.
GFF322 GTP cyclohydrolase II homolog + insig.
GFF323 Possible pyrimidine-degrading protein DUF1688 + insig.
GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) + insig.
GFF325 Nucleoside ABC transporter, substrate-binding protein + insig.

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