Gene info for GFF3108 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 535,346 to 536,350
See nucleotide sequence around GFF3108 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF3103 and GFF3104 are separated by 39 nucleotidesGFF3104 and GFF3105 are separated by 12 nucleotidesGFF3105 and GFF3106 are separated by 34 nucleotidesGFF3106 and GFF3107 are separated by 17 nucleotidesGFF3107 and GFF3108 are separated by 26 nucleotidesGFF3108 and GFF3109 are separated by 115 nucleotidesGFF3109 and GFF3110 overlap by 4 nucleotidesGFF3110 and GFF3111 are separated by 16 nucleotidesGFF3111 and GFF3112 are separated by 34 nucleotidesGFF3112 and GFF3113 are separated by 34 nucleotides GFF3103 - Cys-tRNA(Pro) deacylase YbaK, at 530,949 to 531,443 GFF3103 GFF3104 - no description, at 531,483 to 532,172 GFF3104 GFF3105 - Tas protein, an NADP(H)-dependent aldo-keto reductase, at 532,185 to 533,363 GFF3105 GFF3106 - Hydrolase, alpha/beta fold family, at 533,398 to 534,291 GFF3106 GFF3107 - Oxidoreductase, aldo/keto reductase family, at 534,309 to 535,319 GFF3107 GFF3108 - Transcriptional regulator, LysR family, at 535,346 to 536,350 GFF3108 GFF3109 - Methionine ABC transporter substrate-binding protein, at 536,466 to 537,299 GFF3109 GFF3110 - Nitrilotriacetate monooxygenase component A (EC 1.14.13.-), at 537,296 to 538,645 GFF3110 GFF3111 - hypothetical protein, at 538,662 to 539,012 GFF3111 GFF3112 - Methionine ABC transporter substrate-binding protein, at 539,047 to 539,883 GFF3112 GFF3113 - Methionine ABC transporter permease protein, at 539,918 to 540,580 GFF3113
Locus Name Description Strand Phenotype
GFF3103 Cys-tRNA(Pro) deacylase YbaK - insig.
GFF3104 no description + no data
GFF3105 Tas protein, an NADP(H)-dependent aldo-keto reductase - cofit
GFF3106 Hydrolase, alpha/beta fold family + insig.
GFF3107 Oxidoreductase, aldo/keto reductase family - insig.
GFF3108 Transcriptional regulator, LysR family + insig.
GFF3109 Methionine ABC transporter substrate-binding protein + insig.
GFF3110 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) + insig.
GFF3111 hypothetical protein - insig.
GFF3112 Methionine ABC transporter substrate-binding protein - insig.
GFF3113 Methionine ABC transporter permease protein - insig.

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