Gene info for PS417_01575 in Pseudomonas simiae WCS417

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 347,687 to 348,424
See nucleotide sequence around PS417_01575 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586028986, uniprot: A0A1N7TYN8

Nearby Genes

500 ntPS417_01550 and PS417_01555 are separated by 325 nucleotidesPS417_01555 and PS417_01560 are separated by 231 nucleotidesPS417_01560 and PS417_01565 overlap by 1 nucleotidesPS417_01565 and PS417_01570 are separated by 0 nucleotidesPS417_01570 and PS417_01575 are separated by 39 nucleotidesPS417_01575 and PS417_01580 are separated by 9 nucleotidesPS417_01580 and PS417_01585 are separated by 66 nucleotidesPS417_01585 and PS417_01590 are separated by 50 nucleotidesPS417_01590 and PS417_01595 are separated by 1 nucleotidesPS417_01595 and PS417_01600 are separated by 30 nucleotides PS417_01550: PS417_01550 - cell envelope biogenesis protein AsmA, at 341,729 to 343,939 _01550 PS417_01555: PS417_01555 - MFS transporter, at 344,265 to 345,926 _01555 PS417_01560: PS417_01560 - imidazoleglycerol-phosphate dehydratase, at 346,158 to 346,751 _01560 PS417_01565: PS417_01565 - imidazole glycerol phosphate synthase, at 346,751 to 347,389 _01565 PS417_01570: PS417_01570 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 347,390 to 347,647 _01570 PS417_01575: PS417_01575 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 347,687 to 348,424 _01575 PS417_01580: PS417_01580 - imidazole glycerol phosphate synthase, at 348,434 to 349,204 _01580 PS417_01585: PS417_01585 - amino acid ABC transporter substrate-binding protein, at 349,271 to 350,026 _01585 PS417_01590: PS417_01590 - polysaccharide deacetylase, at 350,077 to 350,850 _01590 PS417_01595: PS417_01595 - peptidase S41, at 350,852 to 352,168 _01595 PS417_01600: PS417_01600 - peptidase M23, at 352,199 to 353,494 _01600
Locus Name Description Strand Phenotype
PS417_01550 PS417_01550 cell envelope biogenesis protein AsmA - strong
PS417_01555 PS417_01555 MFS transporter + strong
PS417_01560 PS417_01560 imidazoleglycerol-phosphate dehydratase + strong
PS417_01565 PS417_01565 imidazole glycerol phosphate synthase + strong
PS417_01570 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase + strong
PS417_01575 PS417_01575 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) + strong
PS417_01580 PS417_01580 imidazole glycerol phosphate synthase + cofit
PS417_01585 PS417_01585 amino acid ABC transporter substrate-binding protein + sig.
PS417_01590 PS417_01590 polysaccharide deacetylase - insig.
PS417_01595 PS417_01595 peptidase S41 - no data
PS417_01600 PS417_01600 peptidase M23 - strong

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