Gene info for GFF3058 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: LysR family transcriptional regulator YbhD
Type 1: Protein-coding gene
Located on scaffold scaffold6.1, + strand, nucleotides 137,664 to 138,581
See nucleotide sequence around GFF3058 or for all of scaffold scaffold6.1

Nearby Genes

500 ntGFF3053 and GFF3054 are separated by 19 nucleotidesGFF3054 and GFF3055 overlap by 1 nucleotidesGFF3055 and GFF3056 are separated by 16 nucleotidesGFF3056 and GFF3057 are separated by 51 nucleotidesGFF3057 and GFF3058 are separated by 108 nucleotidesGFF3058 and GFF3059 overlap by 4 nucleotidesGFF3059 and GFF3060 are separated by 14 nucleotidesGFF3060 and GFF3061 are separated by 17 nucleotidesGFF3061 and GFF3062 are separated by 112 nucleotidesGFF3062 and GFF3063 are separated by 12 nucleotides GFF3053 - Quinone oxidoreductase (EC 1.6.5.5), at 132,140 to 133,129 GFF3053 GFF3054 - Enoyl-CoA hydratase (EC 4.2.1.17), at 133,149 to 133,958 GFF3054 GFF3055 - L-carnitine dehydratase/bile acid-inducible protein F, at 133,958 to 135,148 GFF3055 GFF3056 - MmgE/PrpD family protein, at 135,165 to 136,535 GFF3056 GFF3057 - Tricarboxylate transport protein TctC, at 136,587 to 137,555 GFF3057 GFF3058 - LysR family transcriptional regulator YbhD, at 137,664 to 138,581 GFF3058 GFF3059 - 5-aminopentanamidase (EC 3.5.1.30), at 138,578 to 139,363 GFF3059 GFF3060 - Lysine 2-monooxygenase (EC 1.13.12.2), at 139,378 to 141,066 GFF3060 GFF3061 - FIG00931323: hypothetical protein, at 141,084 to 141,713 GFF3061 GFF3062 - Chromosome initiation inhibitor, at 141,826 to 142,743 GFF3062 GFF3063 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 142,756 to 144,429 GFF3063
Locus Name Description Strand Phenotype
GFF3053 Quinone oxidoreductase (EC 1.6.5.5) - insig.
GFF3054 Enoyl-CoA hydratase (EC 4.2.1.17) - insig.
GFF3055 L-carnitine dehydratase/bile acid-inducible protein F - insig.
GFF3056 MmgE/PrpD family protein - insig.
GFF3057 Tricarboxylate transport protein TctC - insig.
GFF3058 LysR family transcriptional regulator YbhD + insig.
GFF3059 5-aminopentanamidase (EC 3.5.1.30) - cofit
GFF3060 Lysine 2-monooxygenase (EC 1.13.12.2) - strong
GFF3061 FIG00931323: hypothetical protein - cofit
GFF3062 Chromosome initiation inhibitor + cofit
GFF3063 Arginyl-tRNA synthetase (EC 6.1.1.19) + no data

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