Gene info for GFF3044 in Variovorax sp. SCN45

Annotation: LPS-assembly protein LptD @ Organic solvent tolerance protein precursor
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 477,677 to 480,034
See nucleotide sequence around GFF3044 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF3039 and GFF3040 are separated by 181 nucleotidesGFF3040 and GFF3041 are separated by 57 nucleotidesGFF3041 and GFF3042 are separated by 265 nucleotidesGFF3042 and GFF3043 are separated by 4 nucleotidesGFF3043 and GFF3044 are separated by 69 nucleotidesGFF3044 and GFF3045 are separated by 884 nucleotidesGFF3045 and GFF3046 are separated by 64 nucleotidesGFF3046 and GFF3047 overlap by 4 nucleotidesGFF3047 and GFF3048 are separated by 21 nucleotidesGFF3048 and GFF3049 are separated by 40 nucleotides GFF3039 - Two-component transcriptional response regulator, LuxR family, at 471,425 to 472,204 GFF3039 GFF3040 - hypothetical protein, at 472,386 to 474,662 GFF3040 GFF3041 - Outer membrane porin protein 32 precursor, at 474,720 to 475,877 GFF3041 GFF3042 - hypothetical protein, at 476,143 to 476,913 GFF3042 GFF3043 - Response regulator BaeR, at 476,918 to 477,607 GFF3043 GFF3044 - LPS-assembly protein LptD @ Organic solvent tolerance protein precursor, at 477,677 to 480,034 GFF3044 GFF3045 - Glutamine ABC transporter, substrate-binding protein GlnH, at 480,919 to 481,761 GFF3045 GFF3046 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 481,826 to 482,617 GFF3046 GFF3047 - Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4), at 482,614 to 483,393 GFF3047 GFF3048 - Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4), at 483,415 to 484,116 GFF3048 GFF3049 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 484,157 to 484,909 GFF3049
Locus Name Description Strand Phenotype
GFF3039 Two-component transcriptional response regulator, LuxR family - insig.
GFF3040 hypothetical protein + insig.
GFF3041 Outer membrane porin protein 32 precursor - insig.
GFF3042 hypothetical protein + insig.
GFF3043 Response regulator BaeR + insig.
GFF3044 LPS-assembly protein LptD @ Organic solvent tolerance protein precursor + insig.
GFF3045 Glutamine ABC transporter, substrate-binding protein GlnH - insig.
GFF3046 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) - no data
GFF3047 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) - insig.
GFF3048 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) - insig.
GFF3049 Oxidoreductase, short-chain dehydrogenase/reductase family - no data

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