Gene info for GFF3027 in Variovorax sp. SCN45

Annotation: T6SS component TssK (ImpJ/VasE)
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 455,193 to 456,515
See nucleotide sequence around GFF3027 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF3022 and GFF3023 are separated by 23 nucleotidesGFF3023 and GFF3024 are separated by 13 nucleotidesGFF3024 and GFF3025 overlap by 13 nucleotidesGFF3025 and GFF3026 overlap by 4 nucleotidesGFF3026 and GFF3027 are separated by 20 nucleotidesGFF3027 and GFF3028 are separated by 5 nucleotidesGFF3028 and GFF3029 are separated by 58 nucleotidesGFF3029 and GFF3030 overlap by 1 nucleotidesGFF3030 and GFF3031 are separated by 74 nucleotidesGFF3031 and GFF3032 are separated by 195 nucleotides GFF3022 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 450,147 to 451,199 GFF3022 GFF3023 - C4-dicarboxylate transport protein, at 451,223 to 452,497 GFF3023 GFF3024 - Aspartate racemase (EC 5.1.1.13), at 452,511 to 453,245 GFF3024 GFF3025 - Proton/sodium-glutamate symport protein, at 453,233 to 454,702 GFF3025 GFF3026 - KEGG: type VI secretion system protein, at 454,699 to 455,172 GFF3026 GFF3027 - T6SS component TssK (ImpJ/VasE), at 455,193 to 456,515 GFF3027 GFF3028 - T6SS outer membrane component TssL (ImpK/VasF), at 456,521 to 457,282 GFF3028 GFF3029 - T6SS component TssM (IcmF/VasK), at 457,341 to 461,426 GFF3029 GFF3030 - Uncharacterized protein ImpA, at 461,426 to 462,625 GFF3030 GFF3031 - hypothetical protein, at 462,700 to 464,118 GFF3031 GFF3032 - Two-component transcriptional response regulator, LuxR family, at 464,314 to 465,069 GFF3032
Locus Name Description Strand Phenotype
GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF3023 C4-dicarboxylate transport protein + insig.
GFF3024 Aspartate racemase (EC 5.1.1.13) + no data
GFF3025 Proton/sodium-glutamate symport protein + insig.
GFF3026 KEGG: type VI secretion system protein + insig.
GFF3027 T6SS component TssK (ImpJ/VasE) + insig.
GFF3028 T6SS outer membrane component TssL (ImpK/VasF) + insig.
GFF3029 T6SS component TssM (IcmF/VasK) + insig.
GFF3030 Uncharacterized protein ImpA + cofit
GFF3031 hypothetical protein + insig.
GFF3032 Two-component transcriptional response regulator, LuxR family + insig.

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