Gene info for GFF3022 in Variovorax sp. SCN45

Annotation: ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 450,147 to 451,199
See nucleotide sequence around GFF3022 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF3017 and GFF3018 are separated by 5 nucleotidesGFF3018 and GFF3019 are separated by 53 nucleotidesGFF3019 and GFF3020 are separated by 3 nucleotidesGFF3020 and GFF3021 are separated by 63 nucleotidesGFF3021 and GFF3022 overlap by 4 nucleotidesGFF3022 and GFF3023 are separated by 23 nucleotidesGFF3023 and GFF3024 are separated by 13 nucleotidesGFF3024 and GFF3025 overlap by 13 nucleotidesGFF3025 and GFF3026 overlap by 4 nucleotidesGFF3026 and GFF3027 are separated by 20 nucleotides GFF3017 - T6SS AAA+ chaperone ClpV (TssH), at 444,096 to 446,837 GFF3017 GFF3018 - VgrG protein, at 446,843 to 448,783 GFF3018 GFF3019 - hypothetical protein, at 448,837 to 449,511 GFF3019 GFF3020 - FIG00966904: hypothetical protein, at 449,515 to 449,904 GFF3020 GFF3021 - no description, at 449,968 to 450,150 GFF3021 GFF3022 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 450,147 to 451,199 GFF3022 GFF3023 - C4-dicarboxylate transport protein, at 451,223 to 452,497 GFF3023 GFF3024 - Aspartate racemase (EC 5.1.1.13), at 452,511 to 453,245 GFF3024 GFF3025 - Proton/sodium-glutamate symport protein, at 453,233 to 454,702 GFF3025 GFF3026 - KEGG: type VI secretion system protein, at 454,699 to 455,172 GFF3026 GFF3027 - T6SS component TssK (ImpJ/VasE), at 455,193 to 456,515 GFF3027
Locus Name Description Strand Phenotype
GFF3017 T6SS AAA+ chaperone ClpV (TssH) + insig.
GFF3018 VgrG protein + insig.
GFF3019 hypothetical protein + insig.
GFF3020 FIG00966904: hypothetical protein + no data
GFF3021 no description + no data
GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF3023 C4-dicarboxylate transport protein + insig.
GFF3024 Aspartate racemase (EC 5.1.1.13) + no data
GFF3025 Proton/sodium-glutamate symport protein + insig.
GFF3026 KEGG: type VI secretion system protein + insig.
GFF3027 T6SS component TssK (ImpJ/VasE) + insig.

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